Isthmin—a multifaceted protein family

HM Shakhawat, Z Hazrat, Z Zhou - Cells, 2022 - mdpi.com
Isthmin (ISM) is a secreted protein family with two members, namely ISM1 and ISM2, both
containing a TSR1 domain followed by an AMOP domain. Its broad expression pattern …

VPTMdb: a viral posttranslational modification database

Y Xiang, Q Zou, L Zhao - Briefings in Bioinformatics, 2021 - academic.oup.com
In viruses, posttranslational modifications (PTMs) are essential for their life cycle.
Recognizing viral PTMs is very important for a better understanding of the mechanism of …

Optical response of sila-fulleranes in interaction with glycoproteins for environmental monitoring

M Qasemnazhand, F Khoeini, F Marsusi - Frontiers in Physics, 2021 - frontiersin.org
In this paper, we introduce new features of silicon in fullerane structures. Silicon, when
placed in a fullerane structure, increases its electron affinity and electrophilicity index …

Structural analysis and functional evaluation of the disordered ß–hexosyltransferase region from Hamamotoa (Sporobolomyces) singularis

SF Dagher, A Vaishnav, CB Stanley… - … in Bioengineering and …, 2023 - frontiersin.org
Hamamotoa (Sporobolomyces) singularis codes for an industrially important membrane
bound ß-hexosyltransferase (BHT),(BglA, UniprotKB: Q564N5) that has applications in the …

Systems-wide analysis of glycoprotein conformational changes by limited deglycosylation assay

SN Mule, L Rosa-Fernandes, JVP Coutinho… - Journal of …, 2021 - Elsevier
A new method to probe the conformational changes of glycoproteins on a systems-wide
scale, termed limited deglycosylation assay (LDA), is described. The method measures the …

PolarProtPred: predicting apical and basolateral localization of transmembrane proteins using putative short linear motifs and deep learning

L Dobson, A Zeke, GE Tusnády - Bioinformatics, 2021 - academic.oup.com
Motivation Cell polarity refers to the asymmetric organization of cellular components in
various cells. Epithelial cells are the best-known examples of polarized cells, featuring …

N-terminal tail prolines of Gal-3 mediate its oligomerization/phase separation

D Pally, R Bhat - Proceedings of the National Academy of …, 2021 - National Acad Sciences
Galectins are a class of proteins that bind to β-galactose–containing glycoconjugates and
play critical roles in developmental, homeostatic, and pathological contexts (1, 2). Expressed …

Putative linear motifs mediate the trafficking to apical and basolateral membranes

L Dobson, A Zeke, L Szekeres, T Langó, G Tusnády - bioRxiv, 2020 - biorxiv.org
Cell polarity refers to the asymmetric organisation of cellular components in various cells.
Epithelial cells are the best known examples of polarized cells, featuring apical and …

[PDF][PDF] VPTMdb: a viral posttranslational modification database

向宇嘉, 赵莉蔺 - 2020 - ir.ioz.ac.cn
In viruses, posttranslational modifications (PTMs) are essential for their life cycle.
Recognizing viral PTMs is very important for a better understanding of the mechanism of …