One health relationships between human, animal, and environmental microbiomes: a mini-review
P Trinh, JR Zaneveld, S Safranek… - Frontiers in public …, 2018 - frontiersin.org
The One Health concept stresses the ecological relationships between human, animal, and
environmental health. Much of the One Health literature to date has examined the transfer of …
environmental health. Much of the One Health literature to date has examined the transfer of …
Considerations and best practices in animal science 16S ribosomal RNA gene sequencing microbiome studies
Microbiome studies in animal science using 16S rRNA gene sequencing have become
increasingly common in recent years as sequencing costs continue to fall and bioinformatic …
increasingly common in recent years as sequencing costs continue to fall and bioinformatic …
MicrobiomeAnalyst 2.0: comprehensive statistical, functional and integrative analysis of microbiome data
Microbiome studies have become routine in biomedical, agricultural and environmental
sciences with diverse aims, including diversity profiling, functional characterization, and …
sciences with diverse aims, including diversity profiling, functional characterization, and …
Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data
MicrobiomeAnalyst is an easy-to-use, web-based platform for comprehensive analysis of
common data outputs generated from current microbiome studies. It enables researchers …
common data outputs generated from current microbiome studies. It enables researchers …
Longitudinal investigation of the swine gut microbiome from birth to market reveals stage and growth performance associated bacteria
Background Despite recent advances in the understanding of the swine gut microbiome at
different growth stages, a comprehensive longitudinal study of the lifetime (birth to market) …
different growth stages, a comprehensive longitudinal study of the lifetime (birth to market) …
Trophic interactions between predatory protists and pathogen-suppressive bacteria impact plant health
Plant health is strongly impacted by beneficial and pathogenic plant microbes, which are
themselves structured by resource inputs. Organic fertilizer inputs may thus offer a means of …
themselves structured by resource inputs. Organic fertilizer inputs may thus offer a means of …
Mutations in BRCA1 and BRCA2 differentially affect the tumor microenvironment and response to checkpoint blockade immunotherapy
Immune checkpoint blockade (ICB) has improved outcomes for patients with advanced
cancer, but the determinants of response remain poorly understood. Here we report …
cancer, but the determinants of response remain poorly understood. Here we report …
Acetate reprograms gut microbiota during alcohol consumption
Liver damage due to chronic alcohol use is among the most prevalent liver diseases.
Alcohol consumption frequency is a strong factor of microbiota variance. Here we use …
Alcohol consumption frequency is a strong factor of microbiota variance. Here we use …
Pervasive associations between dark septate endophytic fungi with tree root and soil microbiomes across Europe
T Netherway, J Bengtsson, F Buegger… - Nature …, 2024 - nature.com
Trees interact with a multitude of microbes through their roots and root symbionts such as
mycorrhizal fungi and root endophytes. Here, we explore the role of fungal root symbionts as …
mycorrhizal fungi and root endophytes. Here, we explore the role of fungal root symbionts as …
Plant microbiomes harbor potential to promote nutrient turnover in impoverished substrates of a Brazilian biodiversity hotspot
The substrates of the Brazilian campos rupestre s, a grassland ecosystem, have extremely
low concentrations of phosphorus and nitrogen, imposing restrictions to plant growth …
low concentrations of phosphorus and nitrogen, imposing restrictions to plant growth …