Loss-of-function genetic tools for animal models: cross-species and cross-platform differences

BE Housden, M Muhar, M Gemberling… - Nature Reviews …, 2017 - nature.com
Our understanding of the genetic mechanisms that underlie biological processes has relied
extensively on loss-of-function (LOF) analyses. LOF methods target DNA, RNA or protein to …

Structures, functions, and mechanisms of filament forming enzymes: a renaissance of enzyme filamentation

CK Park, NC Horton - Biophysical reviews, 2019 - Springer
Filament formation by non-cytoskeletal enzymes has been known for decades, yet only
relatively recently has its wide-spread role in enzyme regulation and biology come to be …

A genome-wide resource for the analysis of protein localisation in Drosophila

M Sarov, C Barz, H Jambor, MY Hein, C Schmied… - elife, 2016 - elifesciences.org
The Drosophila genome contains> 13000 protein-coding genes, the majority of which
remain poorly investigated. Important reasons include the lack of antibodies or reporter …

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

AA Raz, GS Vida, SR Stern, S Mahadevaraju… - Elife, 2023 - elifesciences.org
Proper differentiation of sperm from germline stem cells, essential for production of the next
generation, requires dramatic changes in gene expression that drive remodeling of almost …

In vivo optogenetic manipulations of endogenous proteins reveal spatiotemporal roles of microtubule and kinesin in dendrite patterning

Y Xu, B Wang, I Bush, HAJ Saunders, J Wildonger… - Science …, 2024 - science.org
During animal development, the spatiotemporal properties of molecular events largely
determine the biological outcomes. Conventional gene analysis methods lack the …

Patronin/Shot cortical foci assemble the noncentrosomal microtubule array that specifies the Drosophila anterior-posterior axis

D Nashchekin, AR Fernandes, D St Johnston - Developmental cell, 2016 - cell.com
Noncentrosomal microtubules play an important role in polarizing differentiated cells, but
little is known about how these microtubules are organized. Here we identify the …

A genetic toolkit for tagging intronic MiMIC containing genes

S Nagarkar-Jaiswal, SZ DeLuca, PT Lee, WW Lin… - Elife, 2015 - elifesciences.org
Previously, we described a large collection of Minos-Mediated Integration Cassettes
(MiMICs) that contain two phiC31 recombinase target sites and allow the generation of a …

An alternative mode of epithelial polarity in the Drosophila midgut

J Chen, AC Sayadian, N Lowe, HE Lovegrove… - PLoS …, 2018 - journals.plos.org
Apical–basal polarity is essential for the formation and function of epithelial tissues, whereas
loss of polarity is a hallmark of tumours. Studies in Drosophila have identified conserved …

The α-Catenin mechanosensing M region is required for cell adhesion during tissue morphogenesis

L Sheppard, DG Green, G Lerchbaumer… - Journal of Cell …, 2022 - rupress.org
α-Catenin couples the cadherin–catenin complex to the actin cytoskeleton. The
mechanosensitive α-Catenin M region undergoes conformational changes upon application …

A nanobody-based toolset to investigate the role of protein localization and dispersal in Drosophila

S Harmansa, I Alborelli, D Bieli, E Caussinus, M Affolter - Elife, 2017 - elifesciences.org
The role of protein localization along the apical-basal axis of polarized cells is difficult to
investigate in vivo, partially due to lack of suitable tools. Here, we present the GrabFP …