The uncultured microbial majority

MS Rappé, SJ Giovannoni - Annual Reviews in Microbiology, 2003 - annualreviews.org
▪ Abstract Since the delineation of 12 bacterial phyla by comparative phylogenetic analyses
of 16S ribosomal RNA in 1987 knowledge of microbial diversity has expanded dramatically …

The ecology of Cytophaga–Flavobacteria in aquatic environments

DL Kirchman - FEMS microbiology ecology, 2002 - academic.oup.com
Culture-dependent and-independent studies have found that prokaryotic assemblages are
quite diverse in aquatic habitats and contain representatives of virtually all of the roughly 40 …

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats

M Simon, C Scheuner, JP Meier-Kolthoff… - The ISME …, 2017 - academic.oup.com
Abstract Marine Rhodobacteraceae (Alphaproteobacteria) are key players of
biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic …

UniFrac: a new phylogenetic method for comparing microbial communities

C Lozupone, R Knight - Applied and environmental microbiology, 2005 - Am Soc Microbiol
We introduce here a new method for computing differences between microbial communities
based on phylogenetic information. This method, UniFrac, measures the phylogenetic …

Diversity and distribution of coral-associated bacteria

F Rohwer, V Seguritan, F Azam… - Marine Ecology Progress …, 2002 - int-res.com
Coral reefs are the most biodiverse of all marine ecosystems; however, very little is known
about prokaryotic diversity in these systems. To address this issue, we sequenced over 1000 …

The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific

DB Rusch, AL Halpern, G Sutton, KB Heidelberg… - PLoS …, 2007 - journals.plos.org
The world's oceans contain a complex mixture of micro-organisms that are for the most part,
uncharacterized both genetically and biochemically. We report here a metagenomic study of …

Biodiversity of vibrios

FL Thompson, T Iida, J Swings - Microbiology and molecular …, 2004 - Am Soc Microbiol
Vibrios are ubiquitous and abundant in the aquatic environment. A high abundance of
vibrios is also detected in tissues and/or organs of various marine algae and animals, eg …

Here a virus, there a virus, everywhere the same virus?

M Breitbart, F Rohwer - Trends in microbiology, 2005 - cell.com
There are an estimated 10 31 viruses on Earth, most of which are phages that infect
bacteria. Metagenomic analyses have shown that environmental viral communities are …

Overview of the Marine Roseobacter Lineage

A Buchan, JM González, MA Moran - Applied and environmental …, 2005 - Am Soc Microbiol
Overview of the Marine Roseobacter Lineage | Applied and Environmental Microbiology CLOSE
This Journal Anywhere Enter words / phrases / DOI / ISBN / keywords / authors / etc Search …

High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates

SA Connon, SJ Giovannoni - Applied and environmental …, 2002 - Am Soc Microbiol
Microbial diversity studies based on the cloning and sequencing of DNA from nature support
the conclusion that only a fraction of the microbial diversity is currently represented in culture …