Text mining and its potential applications in systems biology

S Ananiadou, DB Kell, J Tsujii - Trends in biotechnology, 2006 - cell.com
With biomedical literature increasing at a rate of several thousand papers per week, it is
impossible to keep abreast of all developments; therefore, automated means to manage the …

Frontiers of biomedical text mining: current progress

P Zweigenbaum, D Demner-Fushman… - Briefings in …, 2007 - academic.oup.com
It is now almost 15 years since the publication of the first paper on text mining in the
genomics domain, and decades since the first paper on text mining in the medical domain …

Corpus annotation for mining biomedical events from literature

JD Kim, T Ohta, J Tsujii - BMC bioinformatics, 2008 - Springer
Abstract Background Advanced Text Mining (TM) such as semantic enrichment of papers,
event or relation extraction, and intelligent Question Answering have increasingly attracted …

Biomedical event extraction with hierarchical knowledge graphs

KH Huang, M Yang, N Peng - arXiv preprint arXiv:2009.09335, 2020 - arxiv.org
Biomedical event extraction is critical in understanding biomolecular interactions described
in scientific corpus. One of the main challenges is to identify nested structured events that …

A survey on event extraction for natural language understanding: Riding the biomedical literature wave

G Frisoni, G Moro, A Carbonaro - IEEE Access, 2021 - ieeexplore.ieee.org
Motivation: The scientific literature embeds an enormous amount of relational knowledge,
encompassing interactions between biomedical entities, like proteins, drugs, and symptoms …

[图书][B] Healthcare data analytics

CK Reddy, CC Aggarwal - 2015 - books.google.com
Supplying a comprehensive overview of healthcare analytics research, Healthcare Data
Analytics provides an understanding of the analytical techniques currently available to solve …

Event extraction for systems biology by text mining the literature

S Ananiadou, S Pyysalo, J Tsujii, DB Kell - Trends in biotechnology, 2010 - cell.com
Systems biology recognizes in particular the importance of interactions between biological
components and the consequences of these interactions. Such interactions and their …

From information to knowledge: harvesting entities and relationships from web sources

G Weikum, M Theobald - Proceedings of the twenty-ninth ACM SIGMOD …, 2010 - dl.acm.org
There are major trends to advance the functionality of search engines to a more expressive
semantic level. This is enabled by the advent of knowledge-sharing communities such as …

Biomedical text mining: a survey of recent progress

MS Simpson, D Demner-Fushman - Mining text data, 2012 - Springer
The biomedical community makes extensive use of text mining technology. In the past
several years, enormous progress has been made in developing tools and methods, and the …

Discovering and visualizing indirect associations between biomedical concepts

Y Tsuruoka, M Miwa, K Hamamoto, J Tsujii… - …, 2011 - academic.oup.com
Motivation: Discovering useful associations between biomedical concepts has been one of
the main goals in biomedical text-mining, and understanding their biomedical contexts is …