State feedback stabilization for Boolean control networks

R Li, M Yang, T Chu - IEEE Transactions on Automatic Control, 2013 - ieeexplore.ieee.org
State feedback stabilization for Boolean control networks is investigated in this technical
note. Based on the algebraic representation of logical dynamics in terms of the semi-tensor …

Controllability of Boolean control networks via the Perron–Frobenius theory

D Laschov, M Margaliot - Automatica, 2012 - Elsevier
Boolean control networks (BCNs) are recently attracting considerable interest as
computational models for genetic and cellular networks. Addressing control-theoretic …

A SAT-based algorithm for finding attractors in synchronous Boolean networks

E Dubrova, M Teslenko - IEEE/ACM transactions on …, 2011 - ieeexplore.ieee.org
This paper addresses the problem of finding attractors in synchronous Boolean networks.
The existing Boolean decision diagram-based algorithms have limited capacity due to the …

Control of complex networks requires both structure and dynamics

AJ Gates, LM Rocha - Scientific reports, 2016 - nature.com
The study of network structure has uncovered signatures of the organization of complex
systems. However, there is also a need to understand how to control them; for example …

Statistical Model Checking in BioLab: Applications to the Automated Analysis of T-Cell Receptor Signaling Pathway

EM Clarke, JR Faeder, CJ Langmead, LA Harris… - … Methods in Systems …, 2008 - Springer
We present an algorithm, called BioLab, for verifying temporal properties of rule-based
models of cellular signalling networks. BioLab models are encoded in the BioNetGen …

Output controllability and optimal output control of state-dependent switched Boolean control networks

H Chen, J Sun - Automatica, 2014 - Elsevier
In the present paper, we investigate the output-controllability and optimal output control
problems of a state-dependent switched Boolean control network. By using the semi-tensor …

Systems biology, synthetic biology and control theory: a promising golden braid

JER Cury, FL Baldissera - Annual reviews in control, 2013 - Elsevier
This article provides an overview of how three branches of science, namely Systems
Biology, Synthetic Biology and Control Theory might be interlaced to help solve relevant …

Optimization-based approaches to control of probabilistic Boolean networks

K Kobayashi, K Hiraishi - Algorithms, 2017 - mdpi.com
Control of gene regulatory networks is one of the fundamental topics in systems biology. In
the last decade, control theory of Boolean networks (BNs), which is well known as a model …

[图书][B] Algorithms for analysis, inference, and control of Boolean networks

T Akutsu - 2018 - World Scientific
The Boolean network (BN) is a mathematical model of genetic networks and is based on
Boolean functions. Boolean functions are functions on the Boolean domain that consists of …

Controllability and observability of Boolean networks arising from biology

R Li, M Yang, T Chu - Chaos: An Interdisciplinary Journal of Nonlinear …, 2015 - pubs.aip.org
Boolean networks are currently receiving considerable attention as a computational scheme
for system level analysis and modeling of biological systems. Studying control-related …