[HTML][HTML] A survey on single and multi omics data mining methods in cancer data classification

Z Momeni, E Hassanzadeh, MS Abadeh… - Journal of Biomedical …, 2020 - Elsevier
Data analytics is routinely used to support biomedical research in all areas, with particular
focus on the most relevant clinical conditions, such as cancer. Bioinformatics approaches, in …

The Impact of Apolipoprotein E (APOE) Epigenetics on Aging and Sporadic Alzheimer's Disease

M Lozupone, V Dibello, R Sardone, F Castellana… - Biology, 2023 - mdpi.com
Simple Summary Modifications of gene expression (epigenetic alterations) have been
implicated in the pathogenesis of complex diseases, such as Alzheimer's disease (AD) …

Enhancing anomaly detection accuracy and interpretability in low-quality and class imbalanced data: A comprehensive approach

B Gao, X Kong, S Li, Y Chen, X Zhang, Z Liu, W Lv - Applied Energy, 2024 - Elsevier
With the rapid advancements in smart meters, energy internet, and high-performance
computing technologies, deep learning methods are increasingly used for detecting …

Quantum mechanics-based missing value estimation framework for industrial data

E Oh, H Lee - Expert Systems with Applications, 2024 - Elsevier
As the importance of data-based predictive maintenance frameworks is rising, one of the
emerging issues is the missing values in industrial data. Data with various missing values …

CpG Transformer for imputation of single-cell methylomes

G De Waele, J Clauwaert, G Menschaert… - …, 2022 - academic.oup.com
Motivation The adoption of current single-cell DNA methylation sequencing protocols is
hindered by incomplete coverage, outlining the need for effective imputation techniques …

shinyÉPICo: a graphical pipeline to analyze Illumina DNA methylation arrays

O Morante-Palacios, E Ballestar - Bioinformatics, 2021 - academic.oup.com
Illumina DNA methylation bead arrays provide a cost-effective platform for the simultaneous
analysis of a high number of human samples. However, the analysis can be time …

Surrounding greenness and biological aging based on DNA methylation: a twin and family study in Australia

R Xu, S Li, S Li, EM Wong, MC Southey… - Environmental …, 2021 - ehp.niehs.nih.gov
Background: High surrounding greenness has many health benefits and might contribute to
slower biological aging. However, very few studies have evaluated this from the perspective …

DNA methylation changes associated with type 2 diabetes and diabetic kidney disease in an East Asian population

H Kim, JH Bae, KS Park, J Sung… - The Journal of Clinical …, 2021 - academic.oup.com
Context There is a growing body of evidence that epigenetic changes including DNA
methylation influence the risk of type 2 diabetes (T2D) and its microvascular complications …

Molecular subtyping and survival analysis of osteosarcoma reveals prognostic biomarkers and key canonical pathways

S Southekal, SK Shakyawar, P Bajpai, A Elkholy… - Cancers, 2023 - mdpi.com
Simple Summary Osteosarcoma (OS), which accounts for about 35% of bone malignancy,
shows aggressive progression in adults, adolescents, and children. Neoadjuvant …

Methylation data imputation performances under different representations and missingness patterns

PD Lena, C Sala, A Prodi, C Nardini - Bmc Bioinformatics, 2020 - Springer
Background High-throughput technologies enable the cost-effective collection and analysis
of DNA methylation data throughout the human genome. This naturally entails missing …