Mutational signatures: emerging concepts, caveats and clinical applications

G Koh, A Degasperi, X Zou, S Momen… - Nature Reviews …, 2021 - nature.com
Whole-genome sequencing has brought the cancer genomics community into new territory.
Thanks to the sheer power provided by the thousands of mutations present in each patient's …

Aristolochic acid-associated cancers: a public health risk in need of global action

S Das, S Thakur, M Korenjak, VS Sidorenko… - Nature Reviews …, 2022 - nature.com
Aristolochic acids (AAs) are a group of naturally occurring compounds present in many plant
species of the Aristolochiaceae family. Exposure to AA is a significant risk factor for severe …

The repertoire of mutational signatures in human cancer

LB Alexandrov, J Kim, NJ Haradhvala, MN Huang… - Nature, 2020 - nature.com
Somatic mutations in cancer genomes are caused by multiple mutational processes, each of
which generates a characteristic mutational signature. Here, as part of the Pan-Cancer …

[HTML][HTML] A compendium of mutational signatures of environmental agents

JE Kucab, X Zou, S Morganella, M Joel, AS Nanda… - Cell, 2019 - cell.com
Summary Whole-genome-sequencing (WGS) of human tumors has revealed distinct
mutation patterns that hint at the causative origins of cancer. We examined mutational …

The mutational signature profile of known and suspected human carcinogens in mice

L Riva, AR Pandiri, YR Li, A Droop, J Hewinson… - Nature …, 2020 - nature.com
Epidemiological studies have identified many environmental agents that appear to
significantly increase cancer risk in human populations. By analyzing tumor genomes from …

The genome as a record of environmental exposure

S Nik-Zainal, JE Kucab, S Morganella, D Glodzik… - …, 2015 - academic.oup.com
Whole genome sequencing of human tumours has revealed distinct patterns of mutation that
hint at the causative origins of cancer. Experimental investigations of the mutations and …

The repertoire of mutational signatures in human cancer

LB Alexandrov, J Kim, NJ Haradhvala, MN Huang… - BioRxiv, 2018 - biorxiv.org
Somatic mutations in cancer genomes are caused by multiple mutational processes each of
which generates a characteristic mutational signature. Using 84,729,690 somatic mutations …

Next-generation DNA damage sequencing

C Mingard, J Wu, M McKeague, SJ Sturla - Chemical Society Reviews, 2020 - pubs.rsc.org
Cellular DNA is constantly chemically altered by exogenous and endogenous agents. As all
processes of life depend on the transmission of the genetic information, multiple biological …

In-depth characterization of the cisplatin mutational signature in human cell lines and in esophageal and liver tumors

A Boot, MN Huang, AWT Ng, SC Ho, JQ Lim… - Genome …, 2018 - genome.cshlp.org
Cisplatin reacts with DNA and thereby likely generates a characteristic pattern of somatic
mutations, called a mutational signature. Despite widespread use of cisplatin in cancer …

A comprehensive survey of the mutagenic impact of common cancer cytotoxics

B Szikriszt, Á Póti, O Pipek, M Krzystanek, N Kanu… - Genome biology, 2016 - Springer
Background Genomic mutations caused by cytotoxic agents used in cancer chemotherapy
may cause secondary malignancies as well as contribute to the evolution of treatment …