Mitochondrial genomes revisited: why do different lineages retain different genes?

A Butenko, J Lukeš, D Speijer, JG Wideman - BMC biology, 2024 - Springer
The mitochondria contain their own genome derived from an alphaproteobacterial
endosymbiont. From thousands of protein-coding genes originally encoded by their …

Is the mutation rate lower in genomic regions of stronger selective constraints?

H Liu, J Zhang - Molecular Biology and Evolution, 2022 - academic.oup.com
A study of the plant Arabidopsis thaliana detected lower mutation rates in genomic regions
where mutations are more likely to be deleterious, challenging the principle that …

[HTML][HTML] Spontaneous and environment induced genomic alterations in yeast model

KJ Li, L Qi, YX Zhu, M He, Q Xiang, DQ Zheng - Cell Insight, 2024 - Elsevier
While genomic alterations are fundamental to biological evolution, enabling adaptation and
diversity, they can also result in detrimental outcomes, such as the development of genetic …

Two independent DNA repair pathways cause mutagenesis in template switching deficient Saccharomyces cerevisiae

YK Jiang, EA Medley, GW Brown - Genetics, 2023 - academic.oup.com
Upon DNA replication stress, cells utilize the postreplication repair pathway to repair single-
stranded DNA and maintain genome integrity. Postreplication repair is divided into 2 …

Aurantiochytrium mutant strains exhibiting different colony colors altered the contents of squalene

T Yang, S Kubo, DJ Juntila, Y Iwata… - Bioscience …, 2024 - academic.oup.com
Abstract Aurantiochytrium sp. 18W-13a, a marine heterotrophic protist belonging to the
genus thraustochytrid, is known to accumulate high levels of squalene and carotenoids …

Spontaneous single-nucleotide substitutions and microsatellite mutations have distinct distributions of fitness effects

Y Plavskin, MS de Biase, N Ziv, L Janská, YO Zhu… - PLoS …, 2024 - journals.plos.org
The fitness effects of new mutations determine key properties of evolutionary processes.
Beneficial mutations drive evolution, yet selection is also shaped by the frequency of small …

Mutations in yeast are deleterious on average regardless of the degree of adaptation to the testing environment

K Bao, BR Strayer, NP Braker, AA Chan… - Proceedings …, 2024 - royalsocietypublishing.org
The role of spontaneous mutations in evolution depends on the distribution of their effects on
fitness. Despite a general consensus that new mutations are deleterious on average, a …