The confluence of big data and evolutionary genome mining for the discovery of natural products

MG Chevrette, A Gavrilidou, S Mantri… - Natural product …, 2021 - pubs.rsc.org
This review covers literature between 2003–2021 The development and application of
genome mining tools has given rise to ever-growing genetic and chemical databases and …

Emerging evolutionary paradigms in antibiotic discovery

MG Chevrette, CR Currie - Journal of Industrial Microbiology and …, 2019 - academic.oup.com
Antibiotics revolutionized medicine and remain its cornerstone. Despite their global
importance and the continuous threat of resistant pathogens, few antibiotics have been …

The antimicrobial potential of Streptomyces from insect microbiomes

MG Chevrette, CM Carlson, HE Ortega… - Nature …, 2019 - nature.com
Antimicrobial resistance is a global health crisis and few novel antimicrobials have been
discovered in recent decades. Natural products, particularly from Streptomyces, are the …

Coculture of marine invertebrate-associated bacteria and interdisciplinary technologies enable biosynthesis and discovery of a new antibiotic, keyicin

N Adnani, MG Chevrette, SN Adibhatla… - ACS chemical …, 2017 - ACS Publications
Advances in genomics and metabolomics have made clear in recent years that microbial
biosynthetic capacities on Earth far exceed previous expectations. This is attributable, in …

An antifungal polyketide associated with horizontally acquired genes supports symbiont-mediated defense in Lagria villosa beetles

LV Flórez, K Scherlach, IJ Miller, A Rodrigues… - Nature …, 2018 - nature.com
Microbial symbionts are often a source of chemical novelty and can contribute to host
defense against antagonists. However, the ecological relevance of chemical mediators …

Molecules from the microbiome

EE Shine, JM Crawford - Annual review of biochemistry, 2021 - annualreviews.org
The human microbiome encodes a second genome that dwarfs the genetic capacity of the
host. Microbiota-derived small molecules can directly target human cells and their receptors …

Autometa: automated extraction of microbial genomes from individual shotgun metagenomes

IJ Miller, ER Rees, J Ross, I Miller, J Baxa… - Nucleic acids …, 2019 - academic.oup.com
Shotgun metagenomics is a powerful, high-resolution technique enabling the study of
microbial communities in situ. However, species-level resolution is only achieved after a …

Evolution of combinatorial diversity in trans-acyltransferase polyketide synthase assembly lines across bacteria

EJN Helfrich, R Ueoka, MG Chevrette… - Nature …, 2021 - nature.com
Trans-acyltransferase polyketide synthases (trans-AT PKSs) are bacterial multimodular
enzymes that biosynthesize diverse pharmaceutically and ecologically important …

Horizontal gene transfer to a defensive symbiont with a reduced genome in a multipartite beetle microbiome

SC Waterworth, LV Flórez, ER Rees, C Hertweck… - MBio, 2020 - Am Soc Microbiol
Symbiotic mutualisms of bacteria and animals are ubiquitous in nature, running a continuum
from facultative to obligate from the perspectives of both partners. The loss of functions …

Antibacterial activities of selected pure compounds isolated from gut bacteria of animals living in polluted environments

N Akbar, R Siddiqui, M Iqbal, NA Khan - Antibiotics, 2020 - mdpi.com
Antibiotic resistance is a global threat to public health, further accelerated by the misuse of
antibiotics in humans and animals. Our recent studies have shown that gut bacteria of …