Rhodamine-based ratiometric fluorescent probes based on excitation energy transfer mechanisms: construction and applications in ratiometric sensing

R Zhang, F Yan, Y Huang, D Kong, Q Ye, J Xu… - Rsc Advances, 2016 - pubs.rsc.org
Ratiometric fluorescent probes allow the simultaneous measurement of two fluorescence
signals at different wavelengths followed by calculation of their intensity ratio, which can …

Site-directed fluorescence approaches for dynamic structural biology of membrane peptides and proteins

H Raghuraman, S Chatterjee, A Das - Frontiers in Molecular …, 2019 - frontiersin.org
Membrane proteins mediate a number of cellular functions and are associated with several
diseases and also play a crucial role in pathogenicity. Due to their importance in cellular …

Biophysical insight into furosemide binding to human serum albumin: a study to unveil its impaired albumin binding in uremia

N Zaidi, E Ahmad, M Rehan, G Rabbani… - The Journal of …, 2013 - ACS Publications
Exogenous substances like drugs, when absorbed, enter into the circulatory system and
bind reversibly and extensively to human serum albumin (HSA). But transport of various …

How do the properties of amphiphilic polymer membranes influence the functional insertion of peptide pores?

A Belluati, V Mikhalevich, S Yorulmaz Avsar… - …, 2019 - ACS Publications
Pore-forming peptides are of high biological relevance particularly as cytotoxic agents, but
their properties are also applicable for the permeabilization of lipid membranes for …

Organization and dynamics of membrane probes and proteins utilizing the red edge excitation shift

S Haldar, A Chaudhuri… - The Journal of Physical …, 2011 - ACS Publications
Dynamics of confined water has interesting implications in the organization and function of
molecular assemblies such as membranes. A direct consequence of this type of …

[HTML][HTML] Quantitative assessment of peptide–lipid interactions.: Ubiquitous fluorescence methodologies

PM Matos, HG Franquelim, MARB Castanho… - … et Biophysica Acta (BBA …, 2010 - Elsevier
Peptide–membrane interactions have been gaining increased relevance, mainly in
biomedical investigation, as the potential of the natural, nature-based and synthetic peptides …

[HTML][HTML] Binding and reorientation of melittin in a POPC bilayer: Computer simulations

SJ Irudayam, ML Berkowitz - Biochimica et Biophysica Acta (BBA) …, 2012 - Elsevier
We performed, using an all-atom force field, molecular dynamics computer simulations to
study the binding of melittin to the POPC bilayer and its subsequent reorientation in this …

Measuring membrane penetration depths and conformational changes in membrane peptides and proteins

R Brahma, H Raghuraman - The Journal of Membrane Biology, 2022 - Springer
The structural organization and dynamic nature of the biomembrane components are
important determinants for numerous cellular functions. Particularly, membrane proteins are …

Dual-Fluorescence l-Amino Acid Reports Insertion and Orientation of Melittin Peptide in Cell Membranes

VY Postupalenko, OM Zamotaiev… - Bioconjugate …, 2013 - ACS Publications
Monitoring insertion and orientation of peptides in situ on cell membranes remains a
challenge. To this end, we synthesized an l-amino acid (AFaa) containing a dual …

Hydrophilic sequence-defined cross-linkers for antibody–drug conjugates

JA Walker, MR Sorkin, F Ledesma… - Bioconjugate …, 2019 - ACS Publications
Antibody–drug conjugates (ADCs) are an established modality for the tissue-specific
delivery of chemotherapeutics. However, due to the hydrophobic nature of many cytotoxic …