Energy-driven genome regulation by ATP-dependent chromatin remodellers

S Eustermann, AB Patel, KP Hopfner, Y He… - … Reviews Molecular Cell …, 2024 - nature.com
The packaging of DNA into chromatin in eukaryotes regulates gene transcription, DNA
replication and DNA repair. ATP-dependent chromatin remodelling enzymes (re) arrange …

[HTML][HTML] Modification of enhancer chromatin: what, how, and why?

E Calo, J Wysocka - Molecular cell, 2013 - cell.com
Emergence of form and function during embryogenesis arises in large part through cell-type-
and cell-state-specific variation in gene expression patterns, mediated by specialized cis …

Post-translational modifications of histones that influence nucleosome dynamics

GD Bowman, MG Poirier - Chemical reviews, 2014 - ACS Publications
Nucleosomes are efficient DNA-packaging units. The fundamental protein unit of the
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …

Histone H2A variants in nucleosomes and chromatin: more or less stable?

C Bönisch, SB Hake - Nucleic acids research, 2012 - academic.oup.com
In eukaryotes, DNA is organized together with histones and non-histone proteins into a
highly complex nucleoprotein structure called chromatin, with the nucleosome as its …

Regulated nucleosome mobility and the histone code

MS Cosgrove, JD Boeke, C Wolberger - Nature structural & molecular …, 2004 - nature.com
Post-translational modifications of the histone tails are correlated with distinct chromatin
states that regulate access to DNA. Recent proteomic analyses have revealed several new …

H3. 3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin

P Chen, J Zhao, Y Wang, M Wang, H Long… - Genes & …, 2013 - genesdev.cshlp.org
The histone variants H3. 3 and H2A. Z have recently emerged as two of the most important
features in transcriptional regulation, the molecular mechanism of which still remains poorly …

INO80 exchanges H2A. Z for H2A by translocating on DNA proximal to histone dimers

S Brahma, MI Udugama, J Kim, A Hada… - Nature …, 2017 - nature.com
ATP-dependent chromatin remodellers modulate nucleosome dynamics by mobilizing or
disassembling nucleosomes, as well as altering nucleosome composition. These chromatin …

H2A. Z: view from the top

J Zlatanova, A Thakar - Structure, 2008 - cell.com
For a couple of decades the chromatin field has endured undeserved neglect. Indeed, what
could be so exciting about a monotonous repeating structure whose purpose in life was to …

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

M Zofall, J Persinger, SR Kassabov… - Nature structural & …, 2006 - nature.com
Chromatin-remodeling complexes regulate access to nucleosomal DNA by mobilizing
nucleosomes in an ATP-dependent manner. In this study, we find that chromatin remodeling …

Histone fold modifications control nucleosome unwrapping and disassembly

M Simon, JA North, JC Shimko… - Proceedings of the …, 2011 - National Acad Sciences
Nucleosomes are stable DNA–histone protein complexes that must be unwrapped and
disassembled for genome expression, replication, and repair. Histone posttranslational …