Isobaric labeling-based relative quantification in shotgun proteomics

N Rauniyar, JR Yates III - Journal of proteome research, 2014 - ACS Publications
Mass spectrometry plays a key role in relative quantitative comparisons of proteins in order
to understand their functional role in biological systems upon perturbation. In this review, we …

Fiber-type shifting in sarcopenia of old age: proteomic profiling of the contractile apparatus of skeletal muscles

P Dowling, S Gargan, D Swandulla… - International Journal of …, 2023 - mdpi.com
The progressive loss of skeletal muscle mass and concomitant reduction in contractile
strength plays a central role in frailty syndrome. Age-related neuronal impairments are …

Recent advances in isobaric labeling and applications in quantitative proteomics

MK Sivanich, TJ Gu, DN Tabang, L Li - Proteomics, 2022 - Wiley Online Library
Mass spectrometry (MS) has emerged at the forefront of quantitative proteomic techniques.
Liquid chromatography‐mass spectrometry (LC‐MS) can be used to determine abundances …

The cancer matrisome: From comprehensive characterization to biomarker discovery

AM Socovich, A Naba - Seminars in cell & developmental biology, 2019 - Elsevier
Tumor progression and dissemination critically depend on support from the tumor
microenvironment, the ensemble of cellular and acellular components surrounding and …

Analysis of the plasma proteome using iTRAQ and TMT‐based Isobaric labeling

R Moulder, SD Bhosale, DR Goodlett… - Mass spectrometry …, 2018 - Wiley Online Library
Over the past decade, chemical labeling with isobaric tandem mass tags, such as isobaric
tags for relative and absolute quantification reagents (iTRAQ) and tandem mass tag (TMT) …

Mass spectrometry-based proteomics as an emerging tool in clinical laboratories

AG Birhanu - Clinical Proteomics, 2023 - Springer
Mass spectrometry (MS)-based proteomics have been increasingly implemented in various
disciplines of laboratory medicine to identify and quantify biomolecules in a variety of …

Celastrol exerts a neuroprotective effect by directly binding to HMGB1 protein in cerebral ischemia–reperfusion

DD Liu, P Luo, L Gu, Q Zhang, P Gao, Y Zhu… - Journal of …, 2021 - Springer
Background Celastrol (cel) was one of the earliest isolated and identified chemical
constituents of Tripterygium wilfordii Hook. f. Based on a cel probe (cel-p) that maintained …

Blood-based proteomic biomarkers of Alzheimer's disease pathology

AL Baird, S Westwood, S Lovestone - Frontiers in neurology, 2015 - frontiersin.org
The complexity of Alzheimer's disease (AD) and its long prodromal phase poses challenges
for early diagnosis and yet allows for the possibility of the development of disease modifying …

A tutorial review of labeling methods in Mass spectrometry-based quantitative proteomics

Z Wang, PK Liu, L Li - ACS Measurement Science Au, 2024 - ACS Publications
Recent advancements in mass spectrometry (MS) have revolutionized quantitative
proteomics, with multiplex isotope labeling emerging as a key strategy for enhancing …

Proteomics, metabolomics and metagenomics for type 2 diabetes and its complications

N Wang, F Zhu, L Chen, K Chen - Life Sciences, 2018 - Elsevier
Type 2 diabetes mellitus (T2DM) is one of the most common diseases of endocrine and
metabolic disorders, whose mechanism is still largely unknown. Fortunately, various “omics” …