TL Beck, P Carloni, DN Asthagiri - Journal of Chemical Theory and …, 2024 - ACS Publications
Exascale supercomputers have opened the door to dynamic simulations, facilitated by AI/ML techniques, that model biomolecular motions over unprecedented length and time scales …
Y Wang, Y Hu, JP Guo, J Gao, B Song… - Nature …, 2024 - nature.com
Biological ion channels usually conduct the high-flux transport of 107~ 108 ions· s− 1; however, the underlying mechanism is still lacking. Here, by applying the KcsA potassium …
Understanding protein function would be facilitated by direct, real-time observation of chemical kinetics in the atomic structure. The selectivity filter (SF) of the K+ channel provides …
We report a fast-track computationally driven discovery of new SARS-CoV-2 main protease (Mpro) inhibitors whose potency ranges from mM for the initial non-covalent ligands to sub …
Water molecules within biological ion channels are in a nanoconfined environment and therefore exhibit behaviors which differ from that of bulk water. Here, we investigate the …
Z Zhu, Z Deng, Q Wang, Y Wang, D Zhang… - Frontiers in …, 2022 - frontiersin.org
Ion channels are expressed in almost all living cells, controlling the in-and-out communications, making them ideal drug targets, especially for central nervous system …
J Deng, Q Cui - Journal of the American Chemical Society, 2022 - ACS Publications
Buried charged residues play important roles in the modulation of protein stabilities and conformational dynamics and make crucial contributions to protein functions. Considering …
CK Lam, BL de Groot - Journal of Chemical Theory and …, 2023 - ACS Publications
Potassium channels are responsible for the selective yet efficient permeation of potassium ions across cell membranes. Despite many available high-resolution structures of potassium …
Polarizability, or the tendency of the electron distribution to distort under an electric field, often depends on the local chemical environment. For example, the polarizability of a …