Recent progress in machine learning-based methods for protein fold recognition

L Wei, Q Zou - International journal of molecular sciences, 2016 - mdpi.com
Knowledge on protein folding has a profound impact on understanding the heterogeneity
and molecular function of proteins, further facilitating drug design. Predicting the 3D …

A survey of multiple classifier systems as hybrid systems

M Woźniak, M Grana, E Corchado - Information Fusion, 2014 - Elsevier
A current focus of intense research in pattern classification is the combination of several
classifier systems, which can be built following either the same or different models and/or …

A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition

A Sharma, J Lyons, A Dehzangi, KK Paliwal - Journal of theoretical biology, 2013 - Elsevier
Discovering a three dimensional structure of a protein is a challenging task in biological
science. Classifying a protein into one of its folds is an intermediate step for deciphering the …

Enhanced protein fold prediction method through a novel feature extraction technique

L Wei, M Liao, X Gao, Q Zou - IEEE transactions on …, 2015 - ieeexplore.ieee.org
Information of protein 3-dimensional (3D) structures plays an essential role in molecular
biology, cell biology, biomedicine, and drug design. Protein fold prediction is considered as …

Relevance of machine learning techniques and various protein features in protein fold classification: a review

K Patil, U Chouhan - Current Bioinformatics, 2019 - ingentaconnect.com
Background: Protein fold prediction is a fundamental step in Structural Bioinformatics. The
tertiary structure of a protein determines its function and to predict its tertiary structure, fold …

A tri-gram based feature extraction technique using linear probabilities of position specific scoring matrix for protein fold recognition

KK Paliwal, A Sharma, J Lyons… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
In biological sciences, the deciphering of a three dimensional structure of a protein
sequence is considered to be an important and challenging task. The identification of protein …

Using multiple classifiers for predicting the risk of endovascular aortic aneurysm repair re-intervention through hybrid feature selection

O Attallah, A Karthikesalingam… - Proceedings of the …, 2017 - journals.sagepub.com
Feature selection is essential in medical area; however, its process becomes complicated
with the presence of censoring which is the unique character of survival analysis. Most …

Protein fold recognition based on sparse representation based classification

K Yan, Y Xu, X Fang, C Zheng, B Liu - Artificial intelligence in medicine, 2017 - Elsevier
Abstract Knowledge of protein fold type is critical for determining the protein structure and
function. Because of its importance, several computational methods for fold recognition have …

A strategy to select suitable physicochemical attributes of amino acids for protein fold recognition

A Sharma, KK Paliwal, A Dehzangi, J Lyons, S Imoto… - BMC …, 2013 - Springer
Background Assigning a protein into one of its folds is a transitional step for discovering
three dimensional protein structure, which is a challenging task in bimolecular (biological) …

Profold: Protein fold classification with additional structural features and a novel ensemble classifier

D Chen, X Tian, B Zhou, J Gao - BioMed research international, 2016 - Wiley Online Library
Protein fold classification plays an important role in both protein functional analysis and drug
design. The number of proteins in PDB is very large, but only a very small part is categorized …