Peroxisomes take shape

JJ Smith, JD Aitchison - Nature reviews Molecular cell biology, 2013 - nature.com
Peroxisomes carry out various oxidative reactions that are tightly regulated to adapt to the
changing needs of the cell and varying external environments. Accordingly, they are …

[HTML][HTML] Proliferation and fission of peroxisomes—An update

M Schrader, JL Costello, LF Godinho, AS Azadi… - … et Biophysica Acta (BBA …, 2016 - Elsevier
In mammals, peroxisomes perform crucial functions in cellular metabolism, signalling and
viral defense which are essential to the health and viability of the organism. In order to …

The regulatory landscape of the yeast phosphoproteome

M Leutert, AS Barente, NK Fukuda… - Nature structural & …, 2023 - nature.com
The cellular ability to react to environmental fluctuations depends on signaling networks that
are controlled by the dynamic activities of kinases and phosphatases. Here, to gain insight …

Combining results of multiple search engines in proteomics

D Shteynberg, AI Nesvizhskii, RL Moritz… - Molecular & Cellular …, 2013 - ASBMB
A crucial component of the analysis of shotgun proteomics datasets is the search engine, an
algorithm that attempts to identify the peptide sequence from the parent molecular ion that …

The peroxisome: an update on mysteries

M Islinger, S Grille, HD Fahimi, M Schrader - Histochemistry and cell …, 2012 - Springer
Peroxisomes contribute to several crucial metabolic processes such as β-oxidation of fatty
acids, biosynthesis of ether phospholipids and metabolism of reactive oxygen species …

The yeast nuclear pore complex and transport through it

JD Aitchison, MP Rout - Genetics, 2012 - academic.oup.com
Exchange of macromolecules between the nucleus and cytoplasm is a key regulatory event
in the expression of a cell's genome. This exchange requires a dedicated transport …

Bioactive nutrients and nutrigenomics in age-related diseases

T Rescigno, L Micolucci, MF Tecce, A Capasso - Molecules, 2017 - mdpi.com
The increased life expectancy and the expansion of the elderly population are stimulating
research into aging. Aging may be viewed as a multifactorial process that results from the …

Phosphoproteome dynamics of Saccharomyces cerevisiae under heat shock and cold stress

E Kanshin, P Kubiniok, Y Thattikota… - Molecular systems …, 2015 - embopress.org
The ability of cells and organisms to survive and function through changes in temperature
evolved from their specific adaptations to nonoptimal growth conditions. Responses to …

Affinity proteomics to study endogenous protein complexes: pointers, pitfalls, preferences and perspectives

J LaCava, KR Molloy, MS Taylor, M Domanski… - …, 2015 - Taylor & Francis
Dissecting and studying cellular systems requires the ability to specifically isolate distinct
proteins along with the co-assembled constituents of their associated complexes. Affinity …

Cross-talk phosphorylations by protein kinase C and Pho85p-Pho80p protein kinase regulate Pah1p phosphatidate phosphatase abundance in Saccharomyces …

WM Su, GS Han, GM Carman - Journal of Biological Chemistry, 2014 - ASBMB
Yeast Pah1p is the phosphatidate phosphatase that catalyzes the penultimate step in
triacylglycerol synthesis and plays a role in the transcriptional regulation of phospholipid …