A strategy for the selection of RT-qPCR reference genes based on publicly available transcriptomic datasets

A Nevone, F Lattarulo, M Russo, G Panno, P Milani… - Biomedicines, 2023 - mdpi.com
In the next-generation sequencing era, RT-qPCR is still widely employed to quantify levels
of nucleic acids of interest due to its popularity, versatility, and limited costs. The …

Proteomic study of the microdissected aortic media in human thoracic aortic aneurysms

M Serhatli, K Baysal, C Acilan, E Tuncer… - Journal of proteome …, 2014 - ACS Publications
Aortic aneurysm is a complex multifactorial disease, and its molecular mechanism is not
understood. In thoracic aortic aneurysm (TAA), the expansion of the aortic wall is lead by …

[HTML][HTML] Immune response associated gene signatures in aortic dissection compared to aortic aneurysm

C Doppler, M Rezk, B Arbeithuber… - Frontiers in Bioscience …, 2024 - imrpress.com
Background: Thoracic aortic dissections (TAD) are life-threatening events mostly requiring
immediate surgical treatment. Although dissections mainly occur independently of thoracic …

[HTML][HTML] Hypothesis-free secretome analysis of thoracic aortic aneurysm reinforces the central role of TGF-β cascade in patients with bicuspid aortic valve

S Rocchiccioli, A Cecchettini, P Panesi, PA Farneti… - Journal of …, 2017 - Elsevier
Background Ascending thoracic aortic aneurysm (ATAA) is a major cause of morbidity and
mortality worldwide. The pathogenesis of medial degeneration of the aorta remains …

Validation of qPCR reference genes in lymphocytes from patients with amyotrophic lateral sclerosis

E Usarek, A Barańczyk-Kuźma, B Kaźmierczak… - PLoS …, 2017 - journals.plos.org
Quantitative polymerase chain reaction (qPCR) is the most specific and reliable method for
determination of mRNA gene expression. Crucial point for its accurate normalization is the …

[HTML][HTML] Endothelial nitric oxide synthase alterations are independent of turbulence in the aorta of patients with a unicuspid aortic valve

B Balint, C Kollmann, S Gauer, JM Federspiel… - JTCVS open, 2021 - Elsevier
Objectives Certain aortic valve malformations predispose to ascending aortic aneurysm,
although the mechanisms are incompletely understood. The aim of this study was to …

Endogenous reference genes for gene expression studies on bicuspid aortic valve associated aortopathy in humans

OJ Harrison, N Moorjani, C Torrens, SK Ohri… - PLoS …, 2016 - journals.plos.org
Bicuspid aortic valve (BAV) disease is the most common congenital cardiac abnormality and
predisposes patients to life-threatening aortic complications including aortic aneurysm …

GATA5 and endothelial nitric oxide synthase expression in the ascending aorta is related to aortic size and valve morphology

D Henn, H Perttunen, S Gauer, W Schmied… - The Annals of thoracic …, 2014 - Elsevier
Background The pathogenesis of aortic dilatation in patients with congenital aortic valve
anomalies is poorly understood. Recent studies suggest that alterations of gene expression …

Arterial tissue transcriptional profiles associate with tissue remodeling and cardiovascular phenotype in children with end-stage kidney disease

C Freise, B Schaefer, M Bartosova, A Bayazit… - Scientific reports, 2019 - nature.com
Chronic kidney disease (CKD) greatly increases the risk for cardiovascular disease (CVD).
However, molecular mechanisms underlying CKD-induced arterial remodeling are largely …

Selection of reference genes for quantitative real time PCR (qPCR) assays in tissue from human ascending aorta

C Rueda-Martínez, O Lamas, MJ Mataró… - PloS one, 2014 - journals.plos.org
Dilatation of the ascending aorta (AAD) is a prevalent aortopathy that occurs frequently
associated with bicuspid aortic valve (BAV), the most common human congenital cardiac …