Genetic draft, selective interference, and population genetics of rapid adaptation

RA Neher - Annual review of Ecology, evolution, and …, 2013 - annualreviews.org
To learn about the past from a sample of genomic sequences, one needs to understand how
evolutionary processes shape genetic diversity. Most population genetics inferences are …

Coalescence 2.0: a multiple branching of recent theoretical developments and their applications

A Tellier, C Lemaire - Molecular ecology, 2014 - Wiley Online Library
Population genetics theory has laid the foundations for genomic analyses including the
recent burst in genome scans for selection and statistical inference of past demographic …

Genealogies of rapidly adapting populations

RA Neher, O Hallatschek - Proceedings of the National …, 2013 - National Acad Sciences
The genetic diversity of a species is shaped by its recent evolutionary history and can be
used to infer demographic events or selective sweeps. Most inference methods are based …

[图书][B] Some Mathematical Models from Population Genetics: École D'Été de Probabilités de Saint-Flour XXXIX-2009

A Etheridge - 2011 - books.google.com
This work reflects sixteen hours of lectures delivered by the author at the 2009 St Flour
summer school in probability. It provides a rapid introduction to a range of mathematical …

Fluctuations uncover a distinct class of traveling waves

G Birzu, O Hallatschek… - Proceedings of the …, 2018 - National Acad Sciences
Epidemics, flame propagation, and cardiac rhythms are classic examples of reaction–
diffusion waves that describe a switch from one alternative state to another. Only two types of …

Exact calculation of the probabilities of rare events in cluster-cluster aggregation

R Rajesh, V Subashri, O Zaboronski - Physical Review Letters, 2024 - APS
We develop an action formalism to calculate probabilities of rare events in cluster-cluster
aggregation for arbitrary collision kernels and establish a pathwise large deviation principle …

The genealogy of branching Brownian motion with absorption

J Berestycki, N Berestycki, J Schweinsberg - 2013 - projecteuclid.org
We consider a system of particles which perform branching Brownian motion with negative
drift and are killed upon reaching zero, in the near-critical regime where the total population …

A new coalescent for seed-bank models

J Blath, A González Casanova, N Kurt… - 2016 - projecteuclid.org
We identify a new natural coalescent structure, which we call the seed-bank coalescent, that
describes the gene genealogy of populations under the influence of a strong seed-bank …

Can the site-frequency spectrum distinguish exponential population growth from multiple-merger coalescents?

B Eldon, M Birkner, J Blath, F Freund - Genetics, 2015 - academic.oup.com
The ability of the site-frequency spectrum (SFS) to reflect the particularities of gene
genealogies exhibiting multiple mergers of ancestral lines as opposed to those obtained in …

How mutation affects evolutionary games on graphs

B Allen, A Traulsen, CE Tarnita, MA Nowak - Journal of theoretical biology, 2012 - Elsevier
Evolutionary dynamics are affected by population structure, mutation rates and update rules.
Spatial or network structure facilitates the clustering of strategies, which represents a …