Factors influencing aquatic and terrestrial bacterial community assembly

S Langenheder, ES Lindström - Environmental microbiology …, 2019 - Wiley Online Library
During recent years, many studies have shown that different processes including drift,
environmental selection and dispersal can be important for the assembly of bacterial …

The microbial rare biosphere: current concepts, methods and ecological principles

F Pascoal, R Costa, C Magalhães - FEMS Microbiology Ecology, 2021 - academic.oup.com
Our ability to describe the highly diverse pool of low abundance populations present in
natural microbial communities is increasing at an unprecedented pace. Yet we currently lack …

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China

S Jiao, Y Yang, Y Xu, J Zhang, Y Lu - The ISME Journal, 2020 - academic.oup.com
Revealing the linkages between community assembly and species coexistence, which is
crucial for the understanding of ecosystem diversity and functioning, is a fundamental but …

Stochastic processes shape microeukaryotic community assembly in a subtropical river across wet and dry seasons

W Chen, K Ren, A Isabwe, H Chen, M Liu, J Yang - Microbiome, 2019 - Springer
Background The deep mechanisms (deterministic and/or stochastic processes) underlying
community assembly are a central challenge in microbial ecology. However, the relative …

Abundant fungi adapt to broader environmental gradients than rare fungi in agricultural fields

S Jiao, Y Lu - Global Change Biology, 2020 - Wiley Online Library
Soil communities are intricately linked to ecosystem functioning, and a predictive
understanding of how communities assemble in response to environmental change is of …

Soil pH and temperature regulate assembly processes of abundant and rare bacterial communities in agricultural ecosystems

S Jiao, Y Lu - Environmental Microbiology, 2020 - Wiley Online Library
The factors determining stochastic and deterministic processes that drive microbial
community structure, specifically the balance of abundant and rare bacterial taxa, remain …

Rare taxa maintain the stability of crop mycobiomes and ecosystem functions

C Xiong, JZ He, BK Singh, YG Zhu… - Environmental …, 2021 - Wiley Online Library
Plants harbour highly diverse mycobiomes which sustain essential functions for host health
and productivity. However, ecological processes that govern the plant–mycobiome …

Biogeographic patterns of abundant and rare bacterioplankton in three subtropical bays resulting from selective and neutral processes

Y Mo, W Zhang, J Yang, Y Lin, Z Yu, S Lin - The ISME journal, 2018 - academic.oup.com
Unraveling the relative importance of ecological processes regulating microbial community
structure is a central goal in microbial ecology. Here, we used high-throughput sequencing …

Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China

JQ Su, XL An, B Li, QL Chen, MR Gillings, H Chen… - Microbiome, 2017 - Springer
Background Antibiotic-resistant pathogens are challenging treatment of infections
worldwide. Urban sewage is potentially a major conduit for dissemination of antibiotic …

Spatiotemporal dynamics of the archaeal community in coastal sediments: assembly process and co-occurrence relationship

J Liu, S Zhu, X Liu, P Yao, T Ge, XH Zhang - The ISME Journal, 2020 - academic.oup.com
Studies of marine benthic archaeal communities are updating our view of their taxonomic
composition and metabolic versatility. However, large knowledge gaps remain with regard to …