Machine intelligence in peptide therapeutics: A next‐generation tool for rapid disease screening

S Basith, B Manavalan, T Hwan Shin… - Medicinal research …, 2020 - Wiley Online Library
Discovery and development of biopeptides are time‐consuming, laborious, and dependent
on various factors. Data‐driven computational methods, especially machine learning (ML) …

Artificial intelligence: Machine learning approach for screening large database and drug discovery

PP Parvatikar, S Patil, K Khaparkhuntikar, S Patil… - Antiviral Research, 2023 - Elsevier
Recent research in drug discovery dealing with many faces difficulties, including
development of new drugs during disease outbreak and drug resistance due to rapidly …

HLPpred-Fuse: improved and robust prediction of hemolytic peptide and its activity by fusing multiple feature representation

MM Hasan, N Schaduangrat, S Basith, G Lee… - …, 2020 - academic.oup.com
Motivation Therapeutic peptides failing at clinical trials could be attributed to their toxicity
profiles like hemolytic activity, which hamper further progress of peptides as drug …

Meta-4mCpred: a sequence-based meta-predictor for accurate DNA 4mC site prediction using effective feature representation

B Manavalan, S Basith, TH Shin, L Wei… - Molecular Therapy-Nucleic …, 2019 - cell.com
DNA N4-methylcytosine (4mC) is an important genetic modification and plays crucial roles in
differentiation between self and non-self DNA and in controlling DNA replication, cell cycle …

mAHTPred: a sequence-based meta-predictor for improving the prediction of anti-hypertensive peptides using effective feature representation

B Manavalan, S Basith, TH Shin, L Wei, G Lee - Bioinformatics, 2019 - academic.oup.com
Motivation Cardiovascular disease is the primary cause of death globally accounting for
approximately 17.7 million deaths per year. One of the stakes linked with cardiovascular …

iAFPs-EnC-GA: identifying antifungal peptides using sequential and evolutionary descriptors based multi-information fusion and ensemble learning approach

A Ahmad, S Akbar, M Tahir, M Hayat, F Ali - Chemometrics and Intelligent …, 2022 - Elsevier
Fungal infections have become a serious health concern for human beings worldwide.
Fungal infections usually occur when the invading fungus appear on a particular part of the …

iUmami-SCM: a novel sequence-based predictor for prediction and analysis of umami peptides using a scoring card method with propensity scores of dipeptides

P Charoenkwan, J Yana, C Nantasenamat… - Journal of Chemical …, 2020 - ACS Publications
Umami or the taste of monosodium glutamate represents one of the major attractive taste
modalities in humans. Therefore, knowledge about biophysical and biochemical properties …

SDM6A: a web-based integrative machine-learning framework for predicting 6mA sites in the rice genome

S Basith, B Manavalan, TH Shin, G Lee - Molecular Therapy-Nucleic Acids, 2019 - cell.com
DNA N 6-adenine methylation (6mA) is an epigenetic modification in prokaryotes and
eukaryotes. Identifying 6mA sites in rice genome is important in rice epigenetics and …

iBCE-EL: a new ensemble learning framework for improved linear B-cell epitope prediction

B Manavalan, RG Govindaraj, TH Shin… - Frontiers in …, 2018 - frontiersin.org
Identification of B-cell epitopes (BCEs) is a fundamental step for epitope-based vaccine
development, antibody production, and disease prevention and diagnosis. Due to the …

MLCPP 2.0: an updated cell-penetrating peptides and their uptake efficiency predictor

B Manavalan, MC Patra - Journal of Molecular Biology, 2022 - Elsevier
Cell-penetrating peptides (CPPs) translocate into the cell as various biologically active
conjugates and possess numerous biomedical applications. Several machine learning …