Harnessing genomic information for livestock improvement

M Georges, C Charlier, B Hayes - Nature Reviews Genetics, 2019 - nature.com
The world demand for animal-based food products is anticipated to increase by 70% by
2050. Meeting this demand in a way that has a minimal impact on the environment will …

Dissecting the genetics of complex traits using summary association statistics

B Pasaniuc, AL Price - Nature reviews genetics, 2017 - nature.com
During the past decade, genome-wide association studies (GWAS) have been used to
successfully identify tens of thousands of genetic variants associated with complex traits and …

Integrative approaches for large-scale transcriptome-wide association studies

A Gusev, A Ko, H Shi, G Bhatia, W Chung… - Nature …, 2016 - nature.com
Many genetic variants influence complex traits by modulating gene expression, thus altering
the abundance of one or multiple proteins. Here we introduce a powerful strategy that …

Concepts, estimation and interpretation of SNP-based heritability

J Yang, J Zeng, ME Goddard, NR Wray, PM Visscher - Nature genetics, 2017 - nature.com
Abstract Narrow-sense heritability (h 2) is an important genetic parameter that quantifies the
proportion of phenotypic variance in a trait attributable to the additive genetic variation …

[HTML][HTML] Systematic identification of genetic influences on methylation across the human life course

TR Gaunt, HA Shihab, G Hemani, JL Min, G Woodward… - Genome biology, 2016 - Springer
Background The influence of genetic variation on complex diseases is potentially mediated
through a range of highly dynamic epigenetic processes exhibiting temporal variation during …

Linkage disequilibrium–dependent architecture of human complex traits shows action of negative selection

S Gazal, HK Finucane, NA Furlotte, PR Loh… - Nature …, 2017 - nature.com
Recent work has hinted at the linkage disequilibrium (LD)-dependent architecture of human
complex traits, where SNPs with low levels of LD (LLD) have larger per-SNP heritability …

Reevaluation of SNP heritability in complex human traits

D Speed, N Cai, Ucleb Consortium, MR Johnson… - Nature …, 2017 - nature.com
SNP heritability, the proportion of phenotypic variance explained by SNPs, has been
reported for many hundreds of traits. Its estimation requires strong prior assumptions about …

Genetic variance estimation with imputed variants finds negligible missing heritability for human height and body mass index

J Yang, A Bakshi, Z Zhu, G Hemani, AAE Vinkhuyzen… - Nature …, 2015 - nature.com
We propose a method (GREML-LDMS) to estimate heritability for human complex traits in
unrelated individuals using whole-genome sequencing data. We demonstrate using …

[PDF][PDF] Partitioning heritability of regulatory and cell-type-specific variants across 11 common diseases

A Gusev, SH Lee, G Trynka, H Finucane… - The American Journal of …, 2014 - cell.com
Regulatory and coding variants are known to be enriched with associations identified by
genome-wide association studies (GWASs) of complex disease, but their contributions to …

Defining the role of common variation in the genomic and biological architecture of adult human height

AR Wood, T Esko, J Yang, S Vedantam, TH Pers… - Nature …, 2014 - nature.com
Using genome-wide data from 253,288 individuals, we identified 697 variants at genome-
wide significance that together explained one-fifth of the heritability for adult height. By …