Mechanisms underlying structural variant formation in genomic disorders

CMB Carvalho, JR Lupski - Nature Reviews Genetics, 2016 - nature.com
With the recent burst of technological developments in genomics, and the clinical
implementation of genome-wide assays, our understanding of the molecular basis of …

Mechanisms of structural chromosomal rearrangement formation

B Burssed, M Zamariolli, FT Bellucco… - Molecular …, 2022 - Springer
Structural chromosomal rearrangements result from different mechanisms of formation,
usually related to certain genomic architectural features that may lead to genetic instability …

Mechanisms of telomere loss and their consequences for chromosome instability

K Muraki, K Nyhan, L Han, JP Murnane - Frontiers in oncology, 2012 - frontiersin.org
The ends of chromosomes in mammals, called telomeres, are composed of a 6-bp repeat
sequence, TTAGGG, which is added on by the enzyme telomerase. In combination with a …

Recombination-restarted replication makes inverted chromosome fusions at inverted repeats

KI Mizuno, I Miyabe, SA Schalbetter, AM Carr… - Nature, 2013 - nature.com
Impediments to DNA replication are known to induce gross chromosomal rearrangements
(GCRs) and copy-number variations (CNVs). GCRs and CNVs underlie human genomic …

Large inverted duplications in the human genome form via a fold-back mechanism

KE Hermetz, S Newman, KN Conneely, CL Martin… - PLoS …, 2014 - journals.plos.org
Inverted duplications are a common type of copy number variation (CNV) in germline and
somatic genomes. Large duplications that include many genes can lead to both …

On the sequence‐directed nature of human gene mutation: the role of genomic architecture and the local DNA sequence environment in mediating gene mutations …

DN Cooper, A Bacolla, C Férec, KM Vasquez… - Human …, 2011 - Wiley Online Library
Different types of human gene mutation may vary in size, from structural variants (SVs) to
single base‐pair substitutions, but what they all have in common is that their nature, size and …

Replication stress and genome rearrangements: lessons from yeast models

S Lambert, AM Carr - Current opinion in genetics & development, 2013 - Elsevier
Replication failures induced by replication fork barriers (RFBs) or global replication stress
generate many of the chromosome rearrangement (CR) observed in human genomic …

Breakage–fusion–bridge cycles leading to inv dup del occur in human cleavage stage embryos

T Voet, E Vanneste, N Van der Aa, C Melotte… - Human …, 2011 - Wiley Online Library
Recently, a high incidence of chromosome instability (CIN) was reported in human cleavage
stage embryos. Based on the copy number changes that were observed in the blastomeres …

The human cleavage stage embryo is a cradle of chromosomal rearrangements

T Voet, E Vanneste, JR Vermeesch - Cytogenetic and genome research, 2011 - karger.com
The first cell cycles following in vitro fertilization (IVF) of human gametes are prone to
chromosome instability. Many, but often not all, blastomeres of an embryo acquire a genetic …

Origin-dependent inverted-repeat amplification: a replication-based model for generating palindromic amplicons

BJ Brewer, C Payen, MK Raghuraman… - PLoS genetics, 2011 - journals.plos.org
Background Exposure to environmental stress often selects for cells that have amplified
genes involved in the amelioration of that stress. Sometimes the connection between the …