A new era in functional genomics screens

L Przybyla, LA Gilbert - Nature Reviews Genetics, 2022 - nature.com
The past 25 years of genomics research first revealed which genes are encoded by the
human genome and then a detailed catalogue of human genome variation associated with …

Utilizing graph machine learning within drug discovery and development

T Gaudelet, B Day, AR Jamasb, J Soman… - Briefings in …, 2021 - academic.oup.com
Graph machine learning (GML) is receiving growing interest within the pharmaceutical and
biotechnology industries for its ability to model biomolecular structures, the functional …

The AUTOTAC chemical biology platform for targeted protein degradation via the autophagy-lysosome system

CH Ji, HY Kim, MJ Lee, AJ Heo, DY Park, S Lim… - Nature …, 2022 - nature.com
Targeted protein degradation allows targeting undruggable proteins for therapeutic
applications as well as eliminating proteins of interest for research purposes. While several …

A multiplexed single-cell CRISPR screening platform enables systematic dissection of the unfolded protein response

B Adamson, TM Norman, M Jost, MY Cho, JK Nuñez… - Cell, 2016 - cell.com
Functional genomics efforts face tradeoffs between number of perturbations examined and
complexity of phenotypes measured. We bridge this gap with Perturb-seq, which combines …

The how and why of lncRNA function: an innate immune perspective

EK Robinson, S Covarrubias, S Carpenter - Biochimica et Biophysica Acta …, 2020 - Elsevier
Next-generation sequencing has provided a more complete picture of the composition of the
human transcriptome indicating that much of the “blueprint” is a vastness of poorly …

[HTML][HTML] Inheritable silencing of endogenous genes by hit-and-run targeted epigenetic editing

A Amabile, A Migliara, P Capasso, M Biffi, D Cittaro… - Cell, 2016 - cell.com
Gene silencing is instrumental to interrogate gene function and holds promise for
therapeutic applications. Here, we repurpose the endogenous retroviruses' silencing …

A critical review: recent advancements in the use of CRISPR/Cas9 technology to enhance crops and alleviate global food crises

A Rasheed, RA Gill, MU Hassan, A Mahmood… - Current Issues in …, 2021 - mdpi.com
Genome editing (GE) has revolutionized the biological sciences by creating a novel
approach for manipulating the genomes of living organisms. Many tools have been …

CRISPR/Cas9-targeted mutagenesis of the tomato susceptibility gene PMR4 for resistance against powdery mildew

MI Santillán Martínez, V Bracuto, E Koseoglou… - BMC plant biology, 2020 - Springer
Background The development of CRISPR/Cas9 technology has facilitated targeted
mutagenesis in an efficient and precise way. Previously, RNAi silencing of the susceptibility …

CRISPR interference efficiently induces specific and reversible gene silencing in human iPSCs

MA Mandegar, N Huebsch, EB Frolov, E Shin… - Cell stem cell, 2016 - cell.com
Developing technologies for efficient and scalable disruption of gene expression will provide
powerful tools for studying gene function, developmental pathways, and disease …

Development of Commercial Thermo-sensitive Genic Male Sterile Rice Accelerates Hybrid Rice Breeding Using the CRISPR/Cas9-mediated TMS5 Editing System

H Zhou, M He, J Li, L Chen, Z Huang, S Zheng, L Zhu… - Scientific reports, 2016 - nature.com
Hybrid rice breeding offers an important strategy to improve rice production, in which the
cultivation of a male sterile line is the key to the success of cross-breeding. CRISPR/Cas9 …