Review of the applications of deep learning in bioinformatics

Y Zhang, J Yan, S Chen, M Gong, D Gao… - Current …, 2020 - ingentaconnect.com
Rapid advances in biological research over recent years have significantly enriched
biological and medical data resources. Deep learning-based techniques have been …

[HTML][HTML] Modern scientific visualizations on the web

L Franke, D Haehn - Informatics, 2020 - mdpi.com
Modern scientific visualization is web-based and uses emerging technology such as WebGL
(Web Graphics Library) and WebGPU for three-dimensional computer graphics and WebXR …

Generative adversarial networks in medical image processing

M Gong, S Chen, Q Chen, Y Zeng… - Current pharmaceutical …, 2021 - ingentaconnect.com
Background: The emergence of generative adversarial networks (GANs) has provided new
technology and framework for the application of medical images. Specifically, a GAN …

A taxonomic guide to diffusion MRI tractography visualization tools

M Laamoumi, T Hendriks… - NMR in …, 2024 - Wiley Online Library
Visualizing neuroimaging data is a key step in evaluating data quality, interpreting results,
and communicating findings. This survey focuses on diffusion MRI tractography, which has …

Design and evaluation of interactive proofreading tools for connectomics

D Haehn, S Knowles-Barley, M Roberts… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
Proofreading refers to the manual correction of automatic segmentations of image data. In
connectomics, electron microscopy data is acquired at nanometer-scale resolution and …

NeuroCave: A web-based immersive visualization platform for exploring connectome datasets

JJG Keiriz, L Zhan, O Ajilore, AD Leow… - Network …, 2018 - direct.mit.edu
We introduce NeuroCave, a novel immersive visualization system that facilitates the visual
inspection of structural and functional connectome datasets. The representation of the …

[HTML][HTML] Scalable interactive visualization for connectomics

D Haehn, J Hoffer, B Matejek, A Suissa-Peleg… - Informatics, 2017 - mdpi.com
Connectomics has recently begun to image brain tissue at nanometer resolution, which
produces petabytes of data. This data must be aligned, labeled, proofread, and formed into …

[HTML][HTML] Micro-CTvlab: A web based virtual gallery of biological specimens using X-ray microtomography (micro-CT)

K Keklikoglou, S Faulwetter… - Biodiversity Data …, 2016 - ncbi.nlm.nih.gov
Background During recent years, X-ray microtomography (micro-CT) has seen an increasing
use in biological research areas, such as functional morphology, taxonomy, evolutionary …

Reusable client-side javascript modules for immersive web-based real-time collaborative neuroimage visualization

JL Bernal-Rusiel, N Rannou, RL Gollub… - Frontiers in …, 2017 - frontiersin.org
In this paper we present a web-based software solution to the problem of implementing real-
time collaborative neuroimage visualization. In both clinical and research settings, simple …

Exploring the human connectome topology in group studies

JJG Keiriz, L Zhan, M Chukhman, O Ajilore… - arXiv preprint arXiv …, 2017 - arxiv.org
Visually comparing brain networks, or connectomes, is an essential task in the field of
neuroscience. Especially relevant to the field of clinical neuroscience, group studies that …