Next-generation sequencing in the clinic: promises and challenges

J Xuan, Y Yu, T Qing, L Guo, L Shi - Cancer letters, 2013 - Elsevier
The advent of next generation sequencing (NGS) technologies has revolutionized the field
of genomics, enabling fast and cost-effective generation of genome-scale sequence data …

Pregnancy-associated miRNA-clusters

DM Morales-Prieto, S Ospina-Prieto… - Journal of reproductive …, 2013 - Elsevier
MicroRNAs (miRNAs) are expressed in the placenta and can be detected in maternal
plasma. An increasing number of studies have been published on the cellular origin …

Combined evaluation of a panel of protein and miRNA serum‐exosome biomarkers for pancreatic cancer diagnosis increases sensitivity and specificity

B Madhavan, S Yue, U Galli, S Rana… - … journal of cancer, 2015 - Wiley Online Library
Late diagnosis contributes to pancreatic cancer (PaCa) dismal prognosis, urging for reliable,
early detection. Serum‐exosome protein and/or miRNA markers might be suitable …

Identification of circulating microRNA signatures for breast cancer detection

M Chan, CS Liaw, SM Ji, HH Tan, CY Wong… - Clinical cancer …, 2013 - AACR
Purpose: There is a quest for novel noninvasive diagnostic markers for the detection of
breast cancer. The goal of this study is to identify circulating microRNA (miRNA) signatures …

Discovery of hundreds of mirtrons in mouse and human small RNA data

E Ladewig, K Okamura, AS Flynt, JO Westholm… - Genome …, 2012 - genome.cshlp.org
Atypical miRNA substrates do not fit criteria often used to annotate canonical miRNAs, and
can escape the notice of miRNA genefinders. Recent analyses expanded the catalogs of …

A Molecular Portrait of High-Grade Ductal Carcinoma In Situ

MC Abba, T Gong, Y Lu, J Lee, Y Zhong, E Lacunza… - Cancer research, 2015 - AACR
Ductal carcinoma in situ (DCIS) is a noninvasive precursor lesion to invasive breast
carcinoma. We still have no understanding on why only some DCIS lesions evolve to …

Genome-wide CRISPR screen for essential cell growth mediators in mutant KRAS colorectal cancers

EH Yau, IR Kummetha, G Lichinchi, R Tang, Y Zhang… - Cancer research, 2017 - AACR
Targeting mutant KRAS signaling pathways continues to attract attention as a therapeutic
strategy for KRAS-driven tumors. In this study, we exploited the power of the CRISPR-Cas9 …

[HTML][HTML] RNA sequencing identifies specific PIWI-interacting small non-coding RNA expression patterns in breast cancer

A Hashim, F Rizzo, G Marchese, M Ravo, R Tarallo… - Oncotarget, 2014 - ncbi.nlm.nih.gov
PIWI-interacting small non-coding RNAs (piRNAs) are genetic and epigenetic regulatory
factors in germline cells, where they maintain genome stability, are involved in RNA …

MicroRNA-4639 is a regulator of DJ-1 expression and a potential early diagnostic marker for Parkinson's disease

Y Chen, C Gao, Q Sun, H Pan, P Huang… - Frontiers in aging …, 2017 - frontiersin.org
Parkinson's disease (PD) is the second most common neurodegenerative disorder and has
profound impacts on the daily lives of patients. However, there is a lack of effective …

Refinement of breast cancer molecular classification by miRNA expression profiles

R Søkilde, H Persson, A Ehinger, AC Pirona, M Fernö… - BMC genomics, 2019 - Springer
Background Accurate classification of breast cancer using gene expression profiles has
contributed to a better understanding of the biological mechanisms behind the disease and …