Persistence and degradation dynamics of eDNA affected by environmental factors in aquatic ecosystems

C Joseph, ME Faiq, Z Li, G Chen - Hydrobiologia, 2022 - Springer
Anthropogenic disturbance in natural environments may cause unfavorable habitat
conditions in which old species are lost, or new species are introduced. These interventions …

Enhanced remediation of PAHs-contaminated site soil by bioaugmentation with graphene oxide immobilized bacterial pellets

W Ren, H Liu, T Mao, Y Teng, R Zhao, Y Luo - Journal of Hazardous …, 2022 - Elsevier
Bioaugmentation is considered as a promising technology for cleanup of polycyclic aromatic
hydrocarbons (PAHs) from contaminated site soil, however, available high-efficiency …

Rarefaction is currently the best approach to control for uneven sequencing effort in amplicon sequence analyses

PD Schloss - Msphere, 2024 - Am Soc Microbiol
Considering it is common to find as much as 100-fold variation in the number of 16S rRNA
gene sequences across samples in a study, researchers need to control for the effect of …

Updated virophage taxonomy and distinction from polinton-like viruses

S Roux, MG Fischer, T Hackl, LA Katz, F Schulz… - Biomolecules, 2023 - mdpi.com
Virophages are small dsDNA viruses that hijack the machinery of giant viruses during the co-
infection of a protist (ie, microeukaryotic) host and represent an exceptional case of …

Seasonality and assembly of soil microbial communities in coastal salt marshes invaded by a perennial grass

G Zhang, J Jia, Q Zhao, W Wang, D Wang… - Journal of environmental …, 2023 - Elsevier
Plant invasion profoundly changes the microbial-driven processes in the ecosystem;
however, the seasonality of soil microbial communities and their assembly under plant …

Linking transcriptional dynamics of CH4-cycling grassland soil microbiomes to seasonal gas fluxes

J Täumer, S Marhan, V Groß, C Jensen… - The ISME …, 2022 - academic.oup.com
Soil CH4 fluxes are driven by CH4-producing and-consuming microorganisms that
determine whether soils are sources or sinks of this potent greenhouse gas. To date, a …

Conversion of natural coastal wetlands to mariculture ponds dramatically decreased methane production by reducing substrate availability

Y Dong, J Yuan, J Li, D Liu, Y Qiu, X Zhang… - Agriculture, Ecosystems …, 2023 - Elsevier
Coastal wetlands are increasingly being converted into aquaculture ponds to meet growing
global demand for fish protein. Coastal wetlands conversion has been predicted to result in …

Vegetation and microbes interact to preserve carbon in many wooded peatlands

H Wang, J Tian, H Chen, M Ho, R Vilgalys… - … Earth & Environment, 2021 - nature.com
Peatlands have persisted as massive carbon sinks over millennia, even during past periods
of climate change. The commonly accepted theory of abiotic controls (mainly anoxia and low …

Metagenomic study of carbon metabolism in black soil microbial communities under lead-lanthanum stress

Y Tao, L Shen, S Han, Z Li, Y Cui, Y Lin, J Qu… - Journal of Hazardous …, 2023 - Elsevier
Pollution of soil environments with heavy metals (HMs) and rare earth elements (REEs)
cannot be ignored. We aimed to determine the effects of lead combined with lanthanum (Pb …

Spatial assortment of soil organisms supports the size-plasticity hypothesis

A Isabwe, H Yao, S Zhang, Y Jiang… - ISME …, 2022 - academic.oup.com
The size-plasticity hypothesis posits that larger size organisms are less plastic in their
metabolic rates and, therefore, are more strongly environmental-filtered than smaller …