Mitochondrial DNA as a marker of molecular diversity: a reappraisal

N Galtier, B Nabholz, S Glémin, GDD Hurst - Molecular ecology, 2009 - Wiley Online Library
Over the last three decades, mitochondrial DNA has been the most popular marker of
molecular diversity, for a combination of technical ease‐of‐use considerations, and …

The campaign to DNA barcode all fishes, FISH‐BOL

RD Ward, R Hanner, PDN Hebert - Journal of fish biology, 2009 - Wiley Online Library
FISH‐BOL, the Fish Barcode of Life campaign, is an international research collaboration that
is assembling a standardized reference DNA sequence library for all fishes. Analysis is …

A re‐analysis of the data in Sharkey et al.'s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to …

R Meier, BB Blaimer, E Buenaventura, E Hartop… - …, 2022 - Wiley Online Library
Halting biodiversity decline is one of the most critical challenges for humanity, but monitoring
biodiversity is hampered by taxonomic impediments. One impediment is the large number of …

Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding

SDJ Brown, RA Collins, S Boyer… - Molecular ecology …, 2012 - Wiley Online Library
Abstract Spider: SPecies IDentity and Evolution in R is a new R package implementing a
number of useful analyses for DNA barcoding studies and associated research into species …

Integrative taxonomy: a multisource approach to exploring biodiversity

BC Schlick-Steiner, FM Steiner, B Seifert… - Annual review of …, 2010 - annualreviews.org
Good alpha taxonomy is central to biology. On the basis of a survey of arthropod studies that
used multiple disciplines for species delimitation, we evaluated the performance of single …

On the inappropriate use of Kimura‐2‐parameter (K2P) divergences in the DNA‐barcoding literature

A Srivathsan, R Meier - Cladistics, 2012 - Wiley Online Library
Here we present evidence, based on 10 datasets comprising 5283 sequences for 200
genera, that the use of the Kimura‐2‐parameter (K2P) model in DNA‐barcoding studies is …

The effect of geographical scale of sampling on DNA barcoding

J Bergsten, DT Bilton, T Fujisawa, M Elliott… - Systematic …, 2012 - academic.oup.com
Eight years after DNA barcoding was formally proposed on a large scale, CO1 sequences
are rapidly accumulating from around the world. While studies to date have mostly targeted …

The use of mean instead of smallest interspecific distances exaggerates the size of the “barcoding gap” and leads to misidentification

R Meier, G Zhang, F Ali - Systematic biology, 2008 - academic.oup.com
DNA barcoding is one of the best funded and most visible large-scale initiatives in
systematic biology and has generated both much interest and controversy. DNA barcoding …

Limitations of mitochondrial gene barcoding in Octocorallia

CS McFADDEN, Y Benayahu, E Pante… - Molecular ecology …, 2011 - Wiley Online Library
The widespread assumption that COI and other mitochondrial genes will be ineffective DNA
barcodes for anthozoan cnidarians has not been well tested for most anthozoans other than …

Phylogenetic relationships among Sarcocystis species in cervids, cattle and sheep inferred from the mitochondrial cytochrome c oxidase subunit I gene

B Gjerde - International Journal for Parasitology, 2013 - Elsevier
Coccidian parasites in the genus Sarcocystis have a two-host life cycle, and have
traditionally been identified on the basis of morphological features of the sarcocyst stage in …