Chromatin‐remodeling complexes: Conserved and plant‐specific subunits in Arabidopsis

JY Shang, XJ He - Journal of integrative plant biology, 2022 - Wiley Online Library
Adenosine triphosphate‐dependent chromatin remodeling complexes are important for the
regulation of transcription, DNA replication, and genome stability in eukaryotes. Although …

Roles and activities of chromatin remodeling ATP ases in plants

SK Han, MF Wu, S Cui, D Wagner - The Plant Journal, 2015 - Wiley Online Library
Chromatin remodeling ATP ases and their associated complexes can alter the accessibility
of the genome in the context of chromatin by using energy derived from the hydrolysis of …

Transposition favors the generation of large effect mutations that may facilitate rapid adaption

L Quadrana, M Etcheverry, A Gilly, E Caillieux… - Nature …, 2019 - nature.com
Transposable elements (TEs) are mobile parasitic sequences that have been repeatedly
coopted during evolution to generate new functions and rewire gene regulatory networks …

Arabidopsis FORGETTER1 mediates stress-induced chromatin memory through nucleosome remodeling

K Brzezinka, S Altmann, H Czesnick, P Nicolas… - elife, 2016 - elifesciences.org
Plants as sessile organisms can adapt to environmental stress to mitigate its adverse effects.
As part of such adaptation they maintain an active memory of heat stress for several days …

RNA polymerase II activity revealed by GRO-seq and pNET-seq in Arabidopsis

J Zhu, M Liu, X Liu, Z Dong - Nature plants, 2018 - nature.com
Abstract RNA polymerase II (Pol II) plays an essential role in gene expression. We used
plant native elongating transcript sequencing and global run-on sequencing to profile …

Dual specificity and target gene selection by the MADS-domain protein FRUITFULL

H Van Mourik, P Chen, C Smaczniak, S Boeren… - Nature Plants, 2023 - nature.com
How transcription factors attain their target gene specificity and how this specificity may be
modulated, acquiring different regulatory functions through the development of plant tissues …

Chromatin remodeling complexes regulate genome architecture in Arabidopsis

T Yang, D Wang, G Tian, L Sun, M Yang, X Yin… - The Plant …, 2022 - academic.oup.com
Abstract In eukaryotes, three-dimensional (3D) chromatin architecture maintains genome
stability and is important in regulating gene transcription. However, little is known about the …

The roles of plant hormones and their interactions with regulatory genes in determining meristem activity

ZH Lee, T Hirakawa, N Yamaguchi, T Ito - International journal of …, 2019 - mdpi.com
Plants, unlike animals, have developed a unique system in which they continue to form
organs throughout their entire life cycle, even after embryonic development. This is possible …

Histone modification and chromatin remodeling in plant response to pathogens

H Kang, T Fan, J Wu, Y Zhu, WH Shen - Frontiers in Plant Science, 2022 - frontiersin.org
As sessile organisms, plants are constantly exposed to changing environments frequently
under diverse stresses. Invasion by pathogens, including virus, bacterial and fungal …

Different elongation factors distinctly modulate RNA polymerase II transcription in Arabidopsis

S Obermeyer, L Schrettenbrunner, R Stöckl… - Nucleic Acids …, 2023 - academic.oup.com
Various transcript elongation factors (TEFs) including modulators of RNA polymerase II
(RNAPII) activity and histone chaperones tune the efficiency of transcription in the chromatin …