Clonal hematopoiesis, somatic mosaicism, and age-associated disease

MA Evans, K Walsh - Physiological Reviews, 2023 - journals.physiology.org
Somatic mosaicism, the occurrence of multiple genetically distinct cell clones within the
same tissue, is an evitable consequence of human aging. The hematopoietic system is no …

Pattern recognition receptor signaling and cytokine networks in microbial defenses and regulation of intestinal barriers: implications for inflammatory bowel disease

C Abraham, MT Abreu, JR Turner - Gastroenterology, 2022 - Elsevier
Inflammatory bowel disease is characterized by defects in epithelial function and
dysregulated inflammatory signaling by lamina propria mononuclear cells including …

[HTML][HTML] Single duplex DNA sequencing with CODEC detects mutations with high sensitivity

JH Bae, R Liu, E Roberts, E Nguyen, S Tabrizi… - Nature Genetics, 2023 - nature.com
Detecting mutations from single DNA molecules is crucial in many fields but challenging.
Next-generation sequencing (NGS) affords tremendous throughput but cannot directly …

Clinical genomics for the diagnosis of monogenic forms of inflammatory bowel disease: a position paper from the Paediatric IBD Porto Group of European Society of …

HH Uhlig, F Charbit-Henrion, D Kotlarz… - Journal of pediatric …, 2021 - journals.lww.com
Background: It is important to identify patients with monogenic IBD as management may
differ from classical IBD. In this position statement we formulate recommendations for the …

An integrated taxonomy for monogenic inflammatory bowel disease

C Bolton, CS Smillie, S Pandey, R Elmentaite, G Wei… - Gastroenterology, 2022 - Elsevier
Background & aims Monogenic forms of inflammatory bowel disease (IBD) illustrate the
essential roles of individual genes in pathways and networks safeguarding immune …

Genomic diagnosis and care co-ordination for monogenic inflammatory bowel disease in children and adults: consensus guideline on behalf of the British Society of …

J Kammermeier, CA Lamb, KDJ Jones… - The Lancet …, 2023 - thelancet.com
Genomic medicine enables the identification of patients with rare or ultra-rare monogenic
forms of inflammatory bowel disease (IBD) and supports clinical decision making. Patients …

Common and rare variant prediction and penetrance of IBD in a large, multi-ethnic, health system-based biobank cohort

K Gettler, R Levantovsky, A Moscati, M Giri, Y Wu… - Gastroenterology, 2021 - Elsevier
Background and Aims Polygenic risk scores (PRS) may soon be used to predict
inflammatory bowel disease (IBD) risk in prevention efforts. We leveraged exome-sequence …

[HTML][HTML] Somatic mutations provide important and unique insights into the biology of complex diseases

S Olafsson, CA Anderson - Trends in Genetics, 2021 - cell.com
Somatic evolution of cells within the body is well known to lead to cancers. However, spread
of somatic mutations within a tissue over time may also contribute to the pathogenesis of non …

[HTML][HTML] Histopathology of IBD Colitis. A practical approach from the pathologists of the Italian Group for the study of the gastrointestinal tract (GIPAD)

V Villanacci, L Reggiani-Bonetti, T Salviato… - Pathologica, 2021 - ncbi.nlm.nih.gov
Inflammatory bowel diseases (IBDs) are lifelong disorders in which an interaction between
genetic and environmental factors is involved. IBDs include two entities: Crohn's disease …

[HTML][HTML] Circulating free DNA and its emerging role in autoimmune diseases

P Mondelo-Macía, P Castro-Santos… - Journal of Personalized …, 2021 - mdpi.com
Liquid biopsies can be used to analyse tissue-derived information, including cell-free DNA
(cfDNA), circulating rare cells, and circulating extracellular vesicles in the blood or other …