Carbon-oxygen hydrogen bonding in biological structure and function

S Horowitz, RC Trievel - Journal of Biological Chemistry, 2012 - ASBMB
Carbon-oxygen (CH··· O) hydrogen bonding represents an unusual category of molecular
interactions first documented in biological structures over 4 decades ago. Although CH··· O …

CH groups as donors in hydrogen bonds: a historical overview and occurrence in proteins and nucleic acids

ZS Derewenda - International Journal of Molecular Sciences, 2023 - mdpi.com
Hydrogen bonds constitute a unique type of non-covalent interaction, with a critical role in
biology. Until fairly recently, the canonical view held that these bonds occur between …

Fundamental properties of the CH⊙⊙⊙ O interaction: is it a true hydrogen bond?

Y Gu, T Kar, S Scheiner - Journal of the American Chemical …, 1999 - ACS Publications
Ab initio calculations are used to analyze the CH⊙⊙⊙ O interaction between F n H3-n CH
as proton donor and H2O, CH3OH, and H2CO as acceptor. The interaction is quite weak …

Red-versus blue-shifting hydrogen bonds: are there fundamental distinctions?

S Scheiner, T Kar - The Journal of Physical Chemistry A, 2002 - ACS Publications
The OH covalent bond of conventional hydrogen bonds of the OH⊙⊙⊙ O type undergoes a
lengthening as a result of the complex formation, and the OH stretching frequency shifts to …

Strength of the CαH·· O hydrogen bond of amino acid residues

S Scheiner, T Kar, Y Gu - Journal of Biological Chemistry, 2001 - ASBMB
Although the peptide C α H group has historically not been thought to form hydrogen bonds
within proteins, ab initio quantum calculations show it to be a potent proton donor. Its binding …

Influence of Hybridization and Substitution on the Properties of the CH⊙⊙⊙ O Hydrogen Bond

S Scheiner, SJ Grabowski, T Kar - The Journal of Physical …, 2001 - ACS Publications
Ab initio calculations are used to compare the hydrogen bonding ability of acetylene and
ethylene, and various derivatives, with the analogous properties of alkanes. Water is used …

Biotin's lessons in drug design

DB McConnell - Journal of medicinal chemistry, 2021 - ACS Publications
At the heart of drug design is the discovery of molecules that bind with high affinity to their
drug targets. Biotin forms the strongest known noncovalent ligand–protein interactions with …

Intermolecular CH··· O/N H-bonds in the biologically important pairs of natural nucleobases: a thorough quantum-chemical study

OO Brovarets', YP Yurenko… - Journal of Biomolecular …, 2014 - Taylor & Francis
This study aims to cast light on the physico-chemical nature and energetic of the non-
conventional CH··· O/N H-bonds in the biologically important natural nucleobase pairs using …

Statistical analysis of atomic contacts at RNA–protein interfaces

M Treger, E Westhof - Journal of Molecular Recognition, 2001 - Wiley Online Library
Forty-five crystals of complexes between proteins and RNA molecules from the Protein Data
Bank have been statistically surveyed for the number of contacts between RNA components …

Progress toward understanding the nature and function of CH... O interactions

RK Castellano - Current Organic Chemistry, 2004 - ingentaconnect.com
Recent studies confirm that CH... O hydrogen bonds have many, if not all, of the
spectroscopic and physical earmarks of “traditional” H-bonds. Only more recently have we …