Genomic analyses are sensitive to contamination in public databases caused by incorrectly labeled reference sequences. Here, we describe Conterminator, an efficient method to …
Because of their use in high technologies like computers, smartphones and renewable energy applications, lanthanides (belonging to the group of rare earth elements) are …
H Zafeiropoulos, L Gargan… - MBMG …, 2021 - pdfs.semanticscholar.org
The mitochondrial cytochrome C oxidase subunit I gene (COI) is commonly used in environmental DNA (eDNA) metabarcoding studies, especially for assessing metazoan …
Background Shotgun metagenome analysis provides a robust and verifiable method for comprehensive microbiome analysis of fungal, viral, archaeal and bacterial taxonomy …
Y Wang, H Yuan, J Huang, C Li - Molecular Biology Reports, 2022 - Springer
Background High-throughput sequencing involves library preparation and amplification steps, which may induce contamination across samples or between samples and the …
K Yarlagadda, AJ Zachwieja… - … of the Royal …, 2022 - royalsocietypublishing.org
Canine microbiome studies are often limited in the geographic and temporal scope of samples studied. This results in a paucity of data on the canine microbiome around the …
MK Hess, HE Hodgkinson, AS Hess, L Zetouni… - BMC genomics, 2023 - Springer
Background Producing animal protein while reducing the animal's impact on the environment, eg, through improved feed efficiency and lowered methane emissions, has …
Most experiments studying bacterial microbiomes rely on the PCR amplification of all or part of the gene for the 16S rRNA subunit, which serves as a biomarker for identifying and …
Large scale next generation metagenomic sequencing of complex environmental samples paves the way for detailed analysis of nutrient cycles in ecosystems. For such an analysis …