The road to fully programmable protein catalysis

SL Lovelock, R Crawshaw, S Basler, C Levy, D Baker… - Nature, 2022 - nature.com
The ability to design efficient enzymes from scratch would have a profound effect on
chemistry, biotechnology and medicine. Rapid progress in protein engineering over the past …

Designing artificial metalloenzymes by tuning of the environment beyond the primary coordination sphere

C Van Stappen, Y Deng, Y Liu, H Heidari… - Chemical …, 2022 - ACS Publications
Metalloenzymes catalyze a variety of reactions using a limited number of natural amino
acids and metallocofactors. Therefore, the environment beyond the primary coordination …

Artificial metalloenzymes: reaction scope and optimization strategies

F Schwizer, Y Okamoto, T Heinisch, Y Gu… - Chemical …, 2018 - ACS Publications
The incorporation of a synthetic, catalytically competent metallocofactor into a protein
scaffold to generate an artificial metalloenzyme (ArM) has been explored since the late …

De novo protein design, a retrospective

IV Korendovych, WF DeGrado - Quarterly reviews of biophysics, 2020 - cambridge.org
Proteins are molecular machines whose function depends on their ability to achieve
complex folds with precisely defined structural and dynamic properties. The rational design …

Catalysis and Electron Transfer in De Novo Designed Metalloproteins

KJ Koebke, TBJ Pinter, WC Pitts, VL Pecoraro - Chemical reviews, 2022 - ACS Publications
One of the hallmark advances in our understanding of metalloprotein function is showcased
in our ability to design new, non-native, catalytically active protein scaffolds. This review …

Protein design: toward functional metalloenzymes

F Yu, VM Cangelosi, ML Zastrow, M Tegoni… - Chemical …, 2014 - ACS Publications
Protein design is a valuable tool for understanding the fundamental factors that dictate
protein structure and function. The field of protein design has seen significant progress over …

Overcoming universal restrictions on metal selectivity by protein design

TS Choi, FA Tezcan - Nature, 2022 - nature.com
Selective metal coordination is central to the functions of metalloproteins:, each
metalloprotein must pair with its cognate metallocofactor to fulfil its biological role. However …

Single amino acid bionanozyme for environmental remediation

P Makam, SS Yamijala, VS Bhadram… - Nature …, 2022 - nature.com
Enzymes are extremely complex catalytic structures with immense biological and
technological importance. Nevertheless, their widespread environmental implementation …

Metabolic engineering: past and future

BM Woolston, S Edgar… - Annual review of …, 2013 - annualreviews.org
We present here a broad overview of the field of metabolic engineering, describing in the
first section the key fundamental principles that define and distinguish it, as well as the …

Hydrolytic catalysis and structural stabilization in a designed metalloprotein

ML Zastrow, AFA Peacock, JA Stuckey, VL Pecoraro - Nature Chemistry, 2012 - nature.com
Metal ions are an important part of many natural proteins, providing structural, catalytic and
electron transfer functions. Reproducing these functions in a designed protein is the ultimate …