Serial block face scanning electron microscopy in cell biology: Applications and technology

D Smith, T Starborg - Tissue and Cell, 2019 - Elsevier
Three-dimensional electron microscopy (3DEM) is an imaging field containing several
powerful modalities such as serial section transmission electron microscopy and electron …

Multi-scale computational modeling of spatial calcium handling from nanodomain to whole-heart: Overview and perspectives

MA Colman, E Alvarez-Lacalle, B Echebarria… - Frontiers in …, 2022 - frontiersin.org
Regulation of intracellular calcium is a critical component of cardiac electrophysiology and
excitation-contraction coupling. The calcium spark, the fundamental element of the …

Diesel-derived PM2.5 induces impairment of cardiac movement followed by mitochondria dysfunction in cardiomyocytes

TH Shin, SG Kim, M Ji, DH Kwon, JS Hwang… - Frontiers in …, 2022 - frontiersin.org
Particulate matter (PM) in polluted air can be exposed to the human body through inhalation,
ingestion, and skin contact, accumulating in various organs throughout the body. Organ …

EM-stellar: benchmarking deep learning for electron microscopy image segmentation

A Khadangi, T Boudier, V Rajagopal - Bioinformatics, 2021 - academic.oup.com
Motivation The inherent low contrast of electron microscopy (EM) datasets presents a
significant challenge for rapid segmentation of cellular ultrastructures from EM data. This …

Electron microscopy of cardiac 3D nanodynamics: form, function, future

P Kohl, J Greiner, EA Rog-Zielinska - Nature Reviews Cardiology, 2022 - nature.com
The 3D nanostructure of the heart, its dynamic deformation during cycles of contraction and
relaxation, and the effects of this deformation on cell function remain largely uncharted …

Insights on the impact of mitochondrial organisation on bioenergetics in high-resolution computational models of cardiac cell architecture

S Ghosh, K Tran, LMD Delbridge… - PLOS Computational …, 2018 - journals.plos.org
Recent electron microscopy data have revealed that cardiac mitochondria are not arranged
in crystalline columns but are organised with several mitochondria aggregated into columns …

Quantification of myocyte disarray in human cardiac tissue

F Giardini, E Lazzeri, G Vitale, C Ferrantini… - Frontiers in …, 2021 - frontiersin.org
Proper three-dimensional (3D)-cardiomyocyte orientation is important for an effective
tension production in cardiac muscle. Cardiac diseases can cause severe remodeling …

Comparison of detection method on malaria cell images

WA Mustafa, R Santiagoo, I Jamaluddin… - … Approach in Smart …, 2018 - ieeexplore.ieee.org
In the image analysis process, thresholding is one of the most important preprocessing
steps. Thresholding is a sort of picture division that separates protest apportioning a picture …

Three‐dimensional electron microscopy techniques for unravelling mitochondrial dysfunction in heart failure and identification of new pharmacological targets

HM Daghistani, BS Rajab… - British Journal of …, 2019 - Wiley Online Library
A hallmark of heart failure is mitochondrial dysfunction leading to a bioenergetics imbalance
in the myocardium. Consequently, there is much interest in targeting mitochondrial …

CardioVinci: building blocks for virtual cardiac cells using deep learning

A Khadangi, T Boudier, E Hanssen… - … Transactions of the …, 2022 - royalsocietypublishing.org
Advances in electron microscopy (EM) such as electron tomography and focused ion-beam
scanning electron microscopy provide unprecedented, three-dimensional views of cardiac …