Phylum Gemmatimonadota and its role in the environment

I Mujakić, K Piwosz, M Koblížek - Microorganisms, 2022 - mdpi.com
Bacteria are an important part of every ecosystem that they inhabit on Earth. Environmental
microbiologists usually focus on a few dominant bacterial groups, neglecting less abundant …

Contributions of the early-life microbiome to childhood atopy and asthma development

H Steininger, J Moltzau-Anderson, SV Lynch - Seminars in immunology, 2023 - Elsevier
The rapid rise in atopy and asthma in industrialized nations has led to the identification of
early life environmental factors that promote these conditions and spurred research into how …

Microbiomes in the Challenger Deep slope and bottom-axis sediments

YL Zhou, P Mara, GJ Cui, VP Edgcomb… - Nature communications, 2022 - nature.com
Hadal trenches are the deepest and most remote regions of the ocean. The 11-kilometer
deep Challenger Deep is the least explored due to the technical challenges of sampling …

Rhodobacterales and Rhizobiales Are Associated With Stony Coral Tissue Loss Disease and Its Suspected Sources of Transmission

SM Rosales, AS Clark, LK Huebner… - Frontiers in …, 2020 - frontiersin.org
In 2014, Stony Coral Tissue Loss Disease (SCTLD) was first detected off the coast of Miami,
FL, United States, and continues to persist and spread along the Florida Reef Tractr (FRT) …

Microbial community and geochemical analyses of trans-trench sediments for understanding the roles of hadal environments

S Hiraoka, M Hirai, Y Matsui, A Makabe… - The ISME …, 2020 - academic.oup.com
Hadal trench bottom (> 6000 m below sea level) sediments harbor higher microbial cell
abundance compared with adjacent abyssal plain sediments. This is supported by the …

Multi-environment ecogenomics analysis of the cosmopolitan phylum Gemmatimonadota

I Mujakić, PJ Cabello-Yeves… - Microbiology …, 2023 - Am Soc Microbiol
Gemmatimonadota is a diverse bacterial phylum commonly found in environments such as
soils, rhizospheres, fresh waters, and sediments. So far, the phylum contains just six cultured …

Revealing the full biosphere structure and versatile metabolic functions in the deepest ocean sediment of the Challenger Deep

P Chen, H Zhou, Y Huang, Z Xie, M Zhang, Y Wei, J Li… - Genome Biology, 2021 - Springer
Background The full biosphere structure and functional exploration of the microbial
communities of the Challenger Deep of the Mariana Trench, the deepest known hadal zone …

Spatial patterns and co-occurrence networks of microbial communities related to environmental heterogeneity in deep-sea surface sediments around Yap Trench …

C Zhang, Q Liu, X Li, M Wang, X Liu, J Yang… - Science of the Total …, 2021 - Elsevier
Microbial communities are a large component of abyssal and hadal benthic environments,
especially in deep-sea areas like Yap Trench, they provide a continuous source of nutrients …

Novel viral communities potentially assisting in carbon, nitrogen, and sulfur metabolism in the upper slope sediments of Mariana Trench

J Zhao, H Jing, Z Wang, L Wang, H Jian, R Zhang… - …, 2022 - Am Soc Microbiol
Viruses are ubiquitous in the oceans. Even in the deep sediments of the Mariana Trench,
viruses have high productivity. However, little is known about their species composition and …

Biogeographic distribution, ecotype partitioning and controlling factors of Chloroflexi in the sediments of six hadal trenches of the Pacific Ocean

J Wu, L Wang, J Du, Y Liu, L Hu, H Wei, J Fang… - Science of The Total …, 2023 - Elsevier
The hadal trenches are “hot spots” for mineralization of organic matter in the deep ocean.
Chloroflexi are one of the most dominant and active taxa in trench sediments, serving as …