Nuclear phylogenomics of angiosperms and insights into their relationships and evolution
Angiosperms (flowering plants) are by far the most diverse land plant group with over
300,000 species. The sudden appearance of diverse angiosperms in the fossil record was …
300,000 species. The sudden appearance of diverse angiosperms in the fossil record was …
Adding leaves to the Lepidoptera tree: capturing hundreds of nuclear genes from old museum specimens
C Mayer, L Dietz, E Call, S Kukowka… - Systematic …, 2021 - Wiley Online Library
Museum collections around the world contain billions of specimens, including rare and
extinct species. If their genetic information could be retrieved at a large scale, this would …
extinct species. If their genetic information could be retrieved at a large scale, this would …
Using target sequence capture to improve the phylogenetic resolution of a rapid radiation in New Zealand Veronica
PREMISE Recent, rapid radiations present a challenge for phylogenetic reconstruction. Fast
successive speciation events typically lead to low sequence divergence and poorly resolved …
successive speciation events typically lead to low sequence divergence and poorly resolved …
Taxon‐specific or universal? Using target capture to study the evolutionary history of rapid radiations
Target capture has emerged as an important tool for phylogenetics and population genetics
in nonmodel taxa. Whereas developing taxon‐specific capture probes requires sustained …
in nonmodel taxa. Whereas developing taxon‐specific capture probes requires sustained …
Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla sl (Rosaceae)
DF Morales-Briones, B Gehrke, CH Huang… - Systematic …, 2022 - academic.oup.com
Target enrichment is becoming increasingly popular for phylogenomic studies. Although
baits for enrichment are typically designed to target single-copy genes, paralogs are often …
baits for enrichment are typically designed to target single-copy genes, paralogs are often …
How to Tackle Phylogenetic Discordance in Recent and Rapidly Radiating Groups? Developing a Workflow Using Loricaria (Asteraceae) as an Example
A major challenge in phylogenetics and-genomics is to resolve young rapidly radiating
groups. The fast succession of species increases the probability of incomplete lineage …
groups. The fast succession of species increases the probability of incomplete lineage …
Phylogenomic study of Amorphophallus (Alismatales; Araceae): When plastid DNA gene sequences help to resolve the backbone subgeneric delineation
Encompassing ca. 200 species distributed in paleotropical Africa and Asia, Amorphophallus
is one of the largest genera of Araceae. In spite of the great economic interest in its …
is one of the largest genera of Araceae. In spite of the great economic interest in its …
A new approach using targeted sequence capture for phylogenomic studies across Cactaceae
S Acha, LC Majure - Genes, 2022 - mdpi.com
Relationships within the major clades of Cactaceae are relatively well known based on DNA
sequence data mostly from the chloroplast genome. Nevertheless, some nodes along the …
sequence data mostly from the chloroplast genome. Nevertheless, some nodes along the …
Target capture data resolve recalcitrant relationships in the coffee family (Rubioideae, Rubiaceae)
O Thureborn, SG Razafimandimbison… - Frontiers in Plant …, 2022 - frontiersin.org
Subfamily Rubioideae is the largest of the main lineages in the coffee family (Rubiaceae),
with over 8,000 species and 29 tribes. Phylogenetic relationships among tribes and other …
with over 8,000 species and 29 tribes. Phylogenetic relationships among tribes and other …
African Mountain Thistles: Three New Genera in the Carduus-Cirsium Group
The floras on the highest mountains in tropical eastern Africa are among the most unique
floras in the world. Despite the exceptionally high concentration of endemic species, these …
floras in the world. Despite the exceptionally high concentration of endemic species, these …