Partial least squares-discriminant analysis (PLS-DA) for classification of high-dimensional (HD) data: a review of contemporary practice strategies and knowledge …

LC Lee, CY Liong, AA Jemain - Analyst, 2018 - pubs.rsc.org
Partial least squares-discriminant analysis (PLS-DA) is a versatile algorithm that can be
used for predictive and descriptive modelling as well as for discriminative variable selection …

A tutorial review: Metabolomics and partial least squares-discriminant analysis–a marriage of convenience or a shotgun wedding

PS Gromski, H Muhamadali, DI Ellis, Y Xu, E Correa… - Analytica chimica …, 2015 - Elsevier
The predominance of partial least squares-discriminant analysis (PLS-DA) used to analyze
metabolomics datasets (indeed, it is the most well-known tool to perform classification and …

Partial least squares discriminant analysis: taking the magic away

RG Brereton, GR Lloyd - Journal of Chemometrics, 2014 - Wiley Online Library
Partial least squares discriminant analysis (PLS‐DA) has been available for nearly 20 years
yet is poorly understood by most users. By simple examples, it is shown graphically and …

Multivariate analysis in metabolomics

B Worley, R Powers - Current metabolomics, 2013 - ingentaconnect.com
Metabolomics aims to provide a global snapshot of all small-molecule metabolites in cells
and biological fluids, free of observational biases inherent to more focused studies of …

Reflections on univariate and multivariate analysis of metabolomics data

E Saccenti, HCJ Hoefsloot, AK Smilde, JA Westerhuis… - Metabolomics, 2014 - Springer
Metabolomics experiments usually result in a large quantity of data. Univariate and
multivariate analysis techniques are routinely used to extract relevant information from the …

Support vector machines for classification and regression

RG Brereton, GR Lloyd - Analyst, 2010 - pubs.rsc.org
The increasing interest in Support Vector Machines (SVMs) over the past 15 years is
described. Methods are illustrated using simulated case studies, and 4 experimental case …

Chemometric methods in data processing of mass spectrometry-based metabolomics: A review

L Yi, N Dong, Y Yun, B Deng, D Ren, S Liu… - Analytica chimica acta, 2016 - Elsevier
This review focuses on recent and potential advances in chemometric methods in relation to
data processing in metabolomics, especially for data generated from mass spectrometric …

Assessment of PLSDA cross validation

JA Westerhuis, HCJ Hoefsloot, S Smit, DJ Vis… - Metabolomics, 2008 - Springer
Classifying groups of individuals based on their metabolic profile is one of the main topics in
metabolomics research. Due to the low number of individuals compared to the large number …

NMR and pattern recognition methods in metabolomics: from data acquisition to biomarker discovery: a review

A Smolinska, L Blanchet, LMC Buydens… - Analytica chimica …, 2012 - Elsevier
Metabolomics is the discipline where endogenous and exogenous metabolites are
assessed, identified and quantified in different biological samples. Metabolites are crucial …

Multivariate data analysis in pharmaceutics: a tutorial review

T Rajalahti, OM Kvalheim - International journal of pharmaceutics, 2011 - Elsevier
We provide an overview of latent variable methods used in pharmaceutics and integrated
with advanced characterization techniques such as vibrational spectroscopy. The basics of …