Applications of next-generation sequencing to the study of biological invasions

M Rius, S Bourne, HG Hornsby, MA Chapman - Current Zoology, 2015 - academic.oup.com
Through the widespread implementation of next-generation sequencing (NGS), analyses of
the whole genome (the entire DNA content) and the whole transcriptome (the genes being …

Jellyfish-associated microbiome in the marine environment: exploring its biotechnological potential

T Tinta, T Kogovšek, K Klun, A Malej, GJ Herndl, V Turk - Marine drugs, 2019 - mdpi.com
Despite accumulating evidence of the importance of the jellyfish-associated microbiome to
jellyfish, its potential relevance to blue biotechnology has only recently been recognized. In …

Diversity and temporal patterns of planktonic protist assemblages at a Mediterranean Long Term Ecological Research site

R Piredda, MP Tomasino, AM D'erchia… - FEMS microbiology …, 2017 - academic.oup.com
We tracked temporal changes in protist diversity at the Long Term Ecological Research
(LTER) station MareChiara in the Gulf of Naples (Mediterranean Sea) on eight dates in 2011 …

The importance of molecular characters when morphological variability hinders diagnosability: systematics of the moon jellyfish genus Aurelia (Cnidaria: Scyphozoa)

JW Lawley, E Gamero-Mora, MM Maronna… - PeerJ, 2021 - peerj.com
Cryptic species have been detected across Metazoa, and while no apparent morphological
features distinguish them, it should not impede taxonomists from formal descriptions. We …

[HTML][HTML] Recommendations for developing and applying genetic tools to assess and manage biological invasions in marine ecosystems

JA Darling, BS Galil, GR Carvalho, M Rius, F Viard… - Marine Policy, 2017 - Elsevier
Abstract The European Union's Marine Strategy Framework Directive (MSFD) aims to adopt
integrated ecosystem management approaches to achieve or maintain “Good …

[HTML][HTML] Shelf-life extension of leavened bakery products by using bio-protective cultures and type-III sourdough

M Calasso, M Marzano, GR Caponio, G Celano… - LWT, 2023 - Elsevier
Physicochemical and microbiological alteration of processed foods limits their shelf-life. To
extend the shelf-life of two different types of bakery products, we evaluated the effectiveness …

Human endometrial microbiota at term of normal pregnancies

C Leoni, O Ceci, C Manzari, B Fosso, M Volpicella… - Genes, 2019 - mdpi.com
The endometrium is a challenging site for metagenomic analysis due to difficulties in
obtaining uncontaminated samples and the limited abundance of the bacterial population …

The gut microbiome of the sea urchin, Lytechinus variegatus, from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic …

JA Hakim, H Koo, R Kumar, EJ Lefkowitz… - FEMS Microbiology …, 2016 - academic.oup.com
In this paper, we describe the microbial composition and their predictive metabolic profile in
the sea urchin Lytechinus variegatus gut ecosystem along with samples from its habitat by …

Human access impacts biodiversity of microscopic animals in sandy beaches

A Martínez, EM Eckert, T Artois, G Careddu… - Communications …, 2020 - nature.com
Whereas most work to understand impacts of humans on biodiversity on coastal areas has
focused on large, conspicuous organisms, we highlight effects of tourist access on the …

The importance of jellyfish–microbe interactions for biogeochemical cycles in the ocean

T Tinta, K Klun, GJ Herndl - Limnology and Oceanography, 2021 - Wiley Online Library
Jellyfish blooms can represent a significant but largely overlooked source of organic matter
(OM), in particular at the local and regional scale. We provide an overview of the current …