Microbial metabolites in the marine carbon cycle
One-quarter of photosynthesis-derived carbon on Earth rapidly cycles through a set of short-
lived seawater metabolites that are generated from the activities of marine phytoplankton …
lived seawater metabolites that are generated from the activities of marine phytoplankton …
[HTML][HTML] Anthropogenic and environmental constraints on the microbial methane cycle in coastal sediments
Large amounts of methane, a potent greenhouse gas, are produced in anoxic sediments by
methanogenic archaea. Nonetheless, over 90% of the produced methane is oxidized via …
methanogenic archaea. Nonetheless, over 90% of the produced methane is oxidized via …
[HTML][HTML] Acquiring and analyzing data independent acquisition proteomics experiments without spectrum libraries
Data independent acquisition (DIA) is an attractive alternative to standard shotgun
proteomics methods for quantitative experiments. However, most DIA methods require …
proteomics methods for quantitative experiments. However, most DIA methods require …
[HTML][HTML] Particulate organic carbon deconstructed: molecular and chemical composition of particulate organic carbon in the ocean
The dynamics of the particulate organic carbon (POC) pool in the ocean are central to the
marine carbon cycle. POC is the link between surface primary production, the deep ocean …
marine carbon cycle. POC is the link between surface primary production, the deep ocean …
Challenges and promise at the interface of metaproteomics and genomics: an overview of recent progress in metaproteogenomic data analysis
H Schiebenhoefer, T Van Den Bossche… - Expert Review of …, 2019 - Taylor & Francis
Introduction: The study of microbial communities based on the combined analysis of
genomic and proteomic data–called metaproteogenomics–has gained increased research …
genomic and proteomic data–called metaproteogenomics–has gained increased research …
Microbial functional diversity across biogeochemical provinces in the central Pacific Ocean
Enzymes catalyze key reactions within Earth's life-sustaining biogeochemical cycles. Here,
we use metaproteomics to examine the enzymatic capabilities of the microbial community …
we use metaproteomics to examine the enzymatic capabilities of the microbial community …
Cyanobacteria and cyanophage contributions to carbon and nitrogen cycling in an oligotrophic oxygen-deficient zone
Up to half of marine N losses occur in oxygen-deficient zones (ODZs). Organic matter flux
from productive surface waters is considered a primary control on N2 production. Here we …
from productive surface waters is considered a primary control on N2 production. Here we …
Insects' potential: understanding the functional role of their gut microbiome
M Munoz-Benavent, AE Perez-Cobas… - … of Pharmaceutical and …, 2021 - Elsevier
The study of insect-associated microbial communities is a field of great importance in
agriculture, principally because of the role insects play as pests. In addition, there is a recent …
agriculture, principally because of the role insects play as pests. In addition, there is a recent …
[HTML][HTML] Fish pathology research and diagnosis in aquaculture of farmed fish; a proteomics perspective
Simple Summary The objective of this review is to provide readers with a state-of-the-art
description of the main factors affecting farmed fish pathologies and its diagnoses. A special …
description of the main factors affecting farmed fish pathologies and its diagnoses. A special …
[HTML][HTML] Novel functional insights into the microbiome inhabiting marine plastic debris: critical considerations to counteract the challenges of thin biofilms using multi …
Background Microbial functioning on marine plastic surfaces has been poorly documented,
especially within cold climates where temperature likely impacts microbial activity and the …
especially within cold climates where temperature likely impacts microbial activity and the …