Evolutionary engineering of industrial microorganisms-strategies and applications

Z Zhu, J Zhang, X Ji, Z Fang, Z Wu, J Chen… - Applied microbiology and …, 2018 - Springer
Microbial cells have been widely used in the industry to obtain various biochemical
products, and evolutionary engineering is a common method in biological research to …

Engineering a Bifunctional Phr60-Rap60-Spo0A Quorum-Sensing Molecular Switch for Dynamic Fine-Tuning of Menaquinone-7 Synthesis in Bacillus subtilis

S Cui, X Lv, Y Wu, J Li, G Du… - ACS Synthetic …, 2019 - ACS Publications
Quorum sensing (QS)-based dynamic regulation has been widely used as basic tool for fine-
tuning gene expression in response to cell density changes without adding expensive …

From industrial by‐products to value‐added compounds: the design of efficient microbial cell factories by coupling systems metabolic engineering and bioprocesses

AET Rangel, JM Gómez Ramírez… - Biofuels, Bioproducts …, 2020 - Wiley Online Library
Microbial cell factories have been used for the production of valuable chemical compounds
using a classical metabolic engineering approach, but this requires much time and cost, and …

Pyruvate metabolism redirection for biological production of commodity chemicals in aerobic fungus Aspergillus oryzae

S Zhang, S Wakai, N Sasakura, H Tsutsumi, Y Hata… - Metabolic …, 2020 - Elsevier
Pyruvate is a central metabolite for the biological production of various chemicals. In
eukaryotes, pyruvate produced by glycolysis is used in conversion to ethanol and lactate …

In silico aided metabolic engineering of Klebsiella oxytoca and fermentation optimization for enhanced 2,3-butanediol production

JM Park, H Song, HJ Lee… - Journal of Industrial …, 2013 - academic.oup.com
Klebsiella oxytoca naturally produces a large amount of 2, 3-butanediol (2, 3-BD), a
promising bulk chemical with wide industrial applications, along with various byproducts. In …

A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and …

L Miskovic, S Alff-Tuomala, KC Soh, D Barth… - Biotechnology for …, 2017 - Springer
Background Recent advancements in omics measurement technologies have led to an ever-
increasing amount of available experimental data that necessitate systems-oriented …

Development of an automated culture system for laboratory evolution

T Horinouchi, T Minamoto, S Suzuki… - Journal of …, 2014 - journals.sagepub.com
Laboratory evolution provides phenotype–genotype mappings and quantitative analysis of
selective pressures, giving important insights about evolutionary dynamics. Moreover …

Combining Chemoinformatics with Bioinformatics: In Silico Prediction of Bacterial Flavor-Forming Pathways by a Chemical Systems Biology Approach “Reverse …

M Liu, B Bienfait, O Sacher, J Gasteiger, RJ Siezen… - PLoS …, 2014 - journals.plos.org
The incompleteness of genome-scale metabolic models is a major bottleneck for systems
biology approaches, which are based on large numbers of metabolites as identified and …

Regulons of global transcription factors in Corynebacterium glutamicum

K Toyoda, M Inui - Applied microbiology and biotechnology, 2016 - Springer
Corynebacterium glutamicum, a high GC content gram-positive soil bacterium in
Actinobacteria, has been used for the industrial production of amino acids and engineered …

[PDF][PDF] Conversion technologies for biofuels and their use

HL Chum, F Nigro, R McCormick… - … : bridging the gaps, 2015 - researchgate.net
Integrated assessment studies are beginning to take place in both developed and
developing countries. Initial frameworks for understanding sustainable systems exist. The …