Molecular epidemiology of tuberculosis: current insights

B Mathema, NE Kurepina, PJ Bifani… - Clinical microbiology …, 2006 - Am Soc Microbiol
Molecular epidemiologic studies of tuberculosis (TB) have focused largely on utilizing
molecular techniques to address short-and long-term epidemiologic questions, such as in …

Methods used in the spatial analysis of tuberculosis epidemiology: a systematic review

D Shaweno, M Karmakar, KA Alene, R Ragonnet… - BMC medicine, 2018 - Springer
Background Tuberculosis (TB) transmission often occurs within a household or community,
leading to heterogeneous spatial patterns. However, apparent spatial clustering of TB could …

Genome-Wide Analysis of Synonymous Single Nucleotide Polymorphisms in Mycobacterium tuberculosis Complex Organisms: Resolution of Genetic Relationships …

MM Gutacker, JC Smoot, CAL Migliaccio, SM Ricklefs… - Genetics, 2002 - academic.oup.com
Several human pathogens (eg, Bacillus anthracis, Yersinia pestis, Bordetella pertussis,
Plasmodium falciparum, and Mycobacterium tuberculosis) have very restricted unselected …

Single-Nucleotide Polymorphism–Based Population Genetic Analysis of Mycobacterium tuberculosis Strains from 4 Geographic Sites

MM Gutacker, B Mathema, H Soini… - The Journal of …, 2006 - academic.oup.com
We studied genetic relationships among 5069 Mycobacterium tuberculosis strains
recovered from patients enrolled in 4 population-based studies in the United States and …

Genetic Polymorphism in Mycobacterium tuberculosis Isolates from Patients with Chronic Multidrug-Resistant Tuberculosis

FA Post, PA Willcox, B Mathema… - The Journal of …, 2004 - academic.oup.com
Multidrug-resistant tuberculosis (MDR-TB) is a major public health problem because
treatment is complicated, cure rates are well below those for drug-susceptible tuberculosis …

Extensively drug-resistant tuberculosis in South Africa: genomic evidence supporting transmission in communities

SC Auld, NS Shah, B Mathema… - European …, 2018 - Eur Respiratory Soc
Despite evidence that transmission is driving an extensively drug-resistant TB (XDR-TB)
epidemic, our understanding of where and between whom transmission occurs is limited …

Continued Low Rates of Transmission of Mycobacterium tuberculosis in Norway

UR Dahle, P Sandven, E Heldal… - Journal of clinical …, 2003 - Am Soc Microbiol
In this study, we determined the genetic diversity of Mycobacterium tuberculosis isolated in
Norway from 1999 to 2001. The results were compared to those for strains isolated from …

Genotypic Variation and Stability of Four Variable-Number Tandem Repeats and Their Suitability for Discriminating Strains of Mycobacterium leprae

R Truman, AB Fontes, AB De Miranda… - Journal of clinical …, 2004 - Am Soc Microbiol
It has not been possible to distinguish different strains of Mycobacterium leprae according to
their genetic sequence. However, the genome contains several variable-number tandem …

Descriptive proteomic analysis shows protein variability between closely related clinical isolates of Mycobacterium tuberculosis

C Mehaffy, A Hess, JE Prenni, B Mathema… - …, 2010 - Wiley Online Library
The use of isobaric tags such as iTRAQ allows the relative and absolute quantification of
hundreds of proteins in a single experiment for up to eight different samples. More classical …

Genetic markers, genotyping methods & next generation sequencing in Mycobacterium tuberculosis

S Desikan, S Narayanan - Indian Journal of Medical Research, 2015 - journals.lww.com
Molecular epidemiology (ME) is one of the main areas in tuberculosis research which is
widely used to study the transmission epidemics and outbreaks of tubercle bacilli. It exploits …