[HTML][HTML] SARS-CoV-2 variant biology: immune escape, transmission and fitness

AM Carabelli, TP Peacock, LG Thorne… - Nature Reviews …, 2023 - nature.com
In late 2020, after circulating for almost a year in the human population, severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) exhibited a major step change in its …

SARS-CoV-2 reservoir in post-acute sequelae of COVID-19 (PASC)

AD Proal, MB VanElzakker, S Aleman, K Bach… - Nature …, 2023 - nature.com
Millions of people are suffering from Long COVID or post-acute sequelae of COVID-19
(PASC). Several biological factors have emerged as potential drivers of PASC pathology …

Spheromers reveal robust T cell responses to the Pfizer/BioNTech vaccine and attenuated peripheral CD8+ T cell responses post SARS-CoV-2 infection

F Gao, V Mallajosyula, PS Arunachalam… - Immunity, 2023 - cell.com
T cells are a critical component of the response to SARS-CoV-2, but their kinetics after
infection and vaccination are insufficiently understood. Using" spheromer" peptide-MHC …

SARS-CoV-2 accessory proteins ORF7a and ORF3a use distinct mechanisms to down-regulate MHC-I surface expression

N Arshad, M Laurent-Rolle… - Proceedings of the …, 2023 - National Acad Sciences
Major histocompatibility complex class I (MHC-I) molecules, which are dimers of a
glycosylated polymorphic transmembrane heavy chain and the small-protein β2 …

Inhibition of major histocompatibility complex-I antigen presentation by sarbecovirus ORF7a proteins

F Zhang, TM Zang, EM Stevenson… - Proceedings of the …, 2022 - National Acad Sciences
Viruses employ a variety of strategies to escape or counteract immune responses, including
depletion of cell surface major histocompatibility complex class I (MHC-I), that would …

Positive selection underlies repeated knockout of ORF8 in SARS-CoV-2 evolution

C Wagner, KE Kistler, GA Perchetti, N Baker… - Nature …, 2024 - nature.com
Knockout of the ORF8 protein has repeatedly spread through the global viral population
during SARS-CoV-2 evolution. Here we use both regional and global pathogen sequencing …

Significance of conserved regions in coronavirus spike protein for developing a novel vaccine against SARS-CoV-2 infection

TA Olukitibi, Z Ao, B Warner, R Unat, D Kobasa, X Yao - Vaccines, 2023 - mdpi.com
Over the years, several distinct pathogenic coronaviruses have emerged, including the
pandemic SARS-CoV-2, which is difficult to curtail despite the availability of licensed …

SARS-CoV-2 variants: Impact on biological and clinical outcome

S Mahilkar, S Agrawal, S Chaudhary, S Parikh… - Frontiers in …, 2022 - frontiersin.org
The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) that was first identified
in December 2019, in Wuhan, China was found to be the etiological agent for a novel …

A neonatal mouse model characterizes transmissibility of SARS-CoV-2 variants and reveals a role for ORF8

BA Rodriguez-Rodriguez, GO Ciabattoni… - Nature …, 2023 - nature.com
Small animal models have been a challenge for the study of SARS-CoV-2 transmission, with
most investigators using golden hamsters or ferrets. Mice have the advantages of low cost …

Structural insights into immune escape at killer T cell epitope by SARS-CoV-2 Spike Y453F variants

S Deng, Z Xu, M Wang, J Hu, Z Liu, F Zhu… - Journal of Biological …, 2024 - jbc.org
CD8+ T cell immunity, mediated by human leukocyte antigen (HLA) and T cell receptor
(TCR), plays a critical role in conferring immune memory and protection against viral …