The microcosmos of cancer

A Lujambio, SW Lowe - Nature, 2012 - nature.com
The discovery of microRNAs (miRNAs) almost two decades ago established a new
paradigm of gene regulation. During the past ten years these tiny non-coding RNAs have …

Genetic variation in microRNA networks: the implications for cancer research

BM Ryan, AI Robles, CC Harris - Nature reviews cancer, 2010 - nature.com
Many studies have highlighted the role that microRNAs have in physiological processes and
how their deregulation can lead to cancer. More recently, it has been proposed that the …

A scaling normalization method for differential expression analysis of RNA-seq data

MD Robinson, A Oshlack - Genome biology, 2010 - Springer
The fine detail provided by sequencing-based transcriptome surveys suggests that RNA-seq
is likely to become the platform of choice for interrogating steady state RNA. In order to …

Methodological challenges in utilizing mi RNA s as circulating biomarkers

L Moldovan, KE Batte, J Trgovcich… - Journal of cellular …, 2014 - Wiley Online Library
Micro RNA s (mi RNA s) have emerged as important regulators in the post‐transcriptional
control of gene expression. The discovery of their presence not only in tissues but also in …

MicroRNAs in the p53 network: micromanagement of tumour suppression

H Hermeking - Nature reviews cancer, 2012 - nature.com
In recent years, microRNAs (miRNAs) have been identified as mediators of tumour
suppression and stress responses exerted by the p53 tumour suppressor. p53-regulated …

Mammalian microRNAs: experimental evaluation of novel and previously annotated genes

HR Chiang, LW Schoenfeld, JG Ruby… - Genes & …, 2010 - genesdev.cshlp.org
MicroRNAs (miRNAs) are small regulatory RNAs that derive from distinctive hairpin
transcripts. To learn more about the miRNAs of mammals, we sequenced 60 million small …

IsomiRs–the overlooked repertoire in the dynamic microRNAome

CT Neilsen, GJ Goodall, CP Bracken - Trends in genetics, 2012 - cell.com
The development of deep sequencing has enabled the identification of novel microRNAs
(miRNAs), leading to a growing appreciation for the fact that individual miRNAs can be …

Applications of new sequencing technologies for transcriptome analysis

O Morozova, M Hirst, MA Marra - Annual review of genomics …, 2009 - annualreviews.org
Transcriptome analysis has been a key area of biological inquiry for decades. Over the
years, research in the field has progressed from candidate gene-based detection of RNAs …

MicroRNAs and acute myeloid leukemia: therapeutic implications and emerging concepts

JA Wallace, RM O'Connell - … Journal of the American Society of …, 2017 - ashpublications.org
Acute myeloid leukemia (AML) is a deadly hematologic malignancy characterized by the
uncontrolled growth of immature myeloid cells. Over the past several decades, we have …

Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity

SK Wyman, EC Knouf, RK Parkin, BR Fritz… - Genome …, 2011 - genome.cshlp.org
Modification of microRNA sequences by the 3′ addition of nucleotides to generate so-
called “isomiRs” adds to the complexity of miRNA function, with recent reports showing that …