Next-generation sequencing (NGS) for assessment of microbial water quality: current progress, challenges, and future opportunities
BF Tan, C Ng, JP Nshimyimana, LL Loh… - Frontiers in …, 2015 - frontiersin.org
Water quality is an emergent property of a complex system comprised of interacting
microbial populations and introduced microbial and chemical contaminants. Studies …
microbial populations and introduced microbial and chemical contaminants. Studies …
Next generation sequencing approaches to evaluate water and wastewater quality
The emergence of next generation sequencing (NGS) is revolutionizing the potential to
address complex microbiological challenges in the water industry. NGS technologies can …
address complex microbiological challenges in the water industry. NGS technologies can …
ARGs-OAP v2. 0 with an expanded SARG database and Hidden Markov Models for enhancement characterization and quantification of antibiotic resistance genes in …
Motivation Much global attention has been paid to antibiotic resistance in monitoring its
emergence, accumulation and dissemination. For rapid characterization and quantification …
emergence, accumulation and dissemination. For rapid characterization and quantification …
Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genes
A metagenomic approach and network analysis was used to investigate the wide-spectrum
profiles of antibiotic resistance genes (ARGs) and their co-occurrence patterns in 50 …
profiles of antibiotic resistance genes (ARGs) and their co-occurrence patterns in 50 …
Bacterial community shift drives antibiotic resistance promotion during drinking water chlorination
For comprehensive insights into the effects of chlorination, a widely used disinfection
technology, on bacterial community and antibiotic resistome in drinking water, this study …
technology, on bacterial community and antibiotic resistome in drinking water, this study …
The prevalence of integrons as the carrier of antibiotic resistance genes in natural and man-made environments
Class 1 integrase int I1 has been considered as a good proxy for anthropogenic pollution
because of being linked to genes conferring resistance to antibiotics. The gene cassettes of …
because of being linked to genes conferring resistance to antibiotics. The gene cassettes of …
Metagenomic assembly reveals hosts of antibiotic resistance genes and the shared resistome in pig, chicken, and human feces
The risk associated with antibiotic resistance disseminating from animal and human feces is
an urgent public issue. In the present study, we sought to establish a pipeline for annotating …
an urgent public issue. In the present study, we sought to establish a pipeline for annotating …
Freshwater viral metagenome reveals novel and functional phage-borne antibiotic resistance genes
Background Antibiotic resistance developed by bacteria is a significant threat to global
health. Antibiotic resistance genes (ARGs) spread across different bacterial populations …
health. Antibiotic resistance genes (ARGs) spread across different bacterial populations …
Catalogue of antibiotic resistome and host-tracking in drinking water deciphered by a large scale survey
Background Excesses of antibiotic resistance genes (ARGs), which are regarded as
emerging environmental pollutants, have been observed in various environments. The …
emerging environmental pollutants, have been observed in various environments. The …
[HTML][HTML] Risks of antibiotic resistance genes and antimicrobial resistance under chlorination disinfection with public health concerns
As a widely used disinfection technology, the effects of chlorination on antibiotic resistome
and bacterial community received great scientific concerns, while the pathogens associated …
and bacterial community received great scientific concerns, while the pathogens associated …