Potential use of microbial community genomes in various dimensions of agriculture productivity and its management: a review

MA Iquebal, J Jagannadham, S Jaiswal… - Frontiers in …, 2022 - frontiersin.org
Agricultural productivity is highly influenced by its associated microbial community. With
advancements in omics technology, metagenomics is known to play a vital role in microbial …

Bioinformatics for agriculture in the next-generation sequencing era

A Esposito, C Colantuono, V Ruggieri… - Chemical and Biological …, 2016 - Springer
The key role of bioinformatics is acquiring striking importance in the era of outstanding
advances in omics technologies for its fundamental support in describing the multifaceted …

The mechanisms of improving coastal saline soils by planting rice

Z Xu, T Shao, Z Lv, Y Yue, A Liu, X Long, Z Zhou… - Science of the Total …, 2020 - Elsevier
Planting rice is one of the effective ways to improve saline soils, but the underlying
mechanisms are unknown. We studied basic soil properties (including pH, salt content, total …

Inorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities

VN Kavamura, R Hayat, IM Clark… - Frontiers in …, 2018 - frontiersin.org
The effects of fertilizer regime on bulk soil microbial communities have been well studied,
but this is not the case for the rhizosphere microbiome. The aim of this work was to assess …

Associations between soil bacterial community structure and nutrient cycling functions in long-term organic farm soils following cover crop and organic fertilizer …

AL Fernandez, CC Sheaffer, DL Wyse, C Staley… - Science of the Total …, 2016 - Elsevier
Agricultural management practices can produce changes in soil microbial populations
whose functions are crucial to crop production and may be detectable using high-throughput …

Light exposure mediates circadian rhythms of rhizosphere microbial communities

K Zhao, B Ma, Y Xu, E Stirling, J Xu - The ISME Journal, 2021 - academic.oup.com
Microbial community circadian rhythms have a broad influence on host health and even
though light-induced environmental fluctuations could regulate microbial communities, the …

Enrichment of microbial taxa after the onset of wheat yellow mosaic disease

C Wu, F Wang, A Ge, H Zhang, G Chen, Y Deng… - Agriculture, Ecosystems …, 2021 - Elsevier
Soil-borne Chinese wheat mosaic virus causes yellow mosaic disease in winter wheat and
is transmitted by its vector—Polymyxa graminis—in rhizosphere soil. However, the …

Application of compost and clay under water-stressed conditions influences functional diversity of rhizosphere bacteria

BS Mickan, LK Abbott, J Fan, MM Hart… - Biology and fertility of …, 2018 - Springer
Applications of compost and clay to ameliorate soil constraints such as water stress are
potential management strategies for sandy agricultural soils. Water repellent sandy soils in …

Back to the roots: defining the core microbiome of Sorghum bicolor in agricultural field soils from the centre of origin

S Abera, M Shimels, T Tessema… - FEMS microbiology …, 2022 - academic.oup.com
Sorghum is a major staple crop in sub-Saharan Africa with yields severely impacted by biotic
and abiotic factors. Here, we analysed the taxonomic diversity and biogeographical …

Co-variation of bacterial and fungal communities in different sorghum cultivars and growth stages is soil dependent

TR Schlemper, JA van Veen, EE Kuramae - Microbial ecology, 2018 - Springer
Rhizosphere microbial community composition can be influenced by different biotic and
abiotic factors. We investigated the composition and co-variation of rhizosphere bacterial …