Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria

A Feurtey, C Lorrain, D Croll, C Eschenbrenner… - BMC genomics, 2020 - Springer
Background Antagonistic co-evolution can drive rapid adaptation in pathogens and shape
genome architecture. Comparative genome analyses of several fungal pathogens revealed …

Analysis of fungal genomes reveals commonalities of intron gain or loss and functions in intron-poor species

CS Lim, BN Weinstein, SW Roy… - Molecular Biology and …, 2021 - academic.oup.com
Previous evolutionary reconstructions have concluded that early eukaryotic ancestors
including both the last common ancestor of eukaryotes and of all fungi had intron-rich …

Transposon-derived introns as an element shaping the structure of eukaryotic genomes

W Mikina, P Hałakuc, R Milanowski - Mobile DNA, 2024 - Springer
The widely accepted hypothesis postulates that the first spliceosomal introns originated from
group II self-splicing introns. However, it is evident that not all spliceosomal introns in the …

Interspecific gene exchange introduces high genetic variability in crop pathogen

A Feurtey, DM Stevens, W Stephan… - Genome Biology and …, 2019 - academic.oup.com
Genome analyses have revealed a profound role of hybridization and introgression in the
evolution of many eukaryote lineages, including fungi. The impact of recurrent introgression …

Whole-Genome Comparisons of Ergot Fungi Reveals the Divergence and Evolution of Species within the Genus Claviceps Are the Result of Varying Mechanisms …

SA Wyka, SJ Mondo, M Liu, J Dettman… - Genome biology and …, 2021 - academic.oup.com
The genus Claviceps has been known for centuries as an economically important fungal
genus for pharmacology and agricultural research. Only recently have researchers begun to …

Population-level transposable element expression dynamics influence trait evolution in a fungal crop pathogen

LN Abraham, U Oggenfuss, D Croll - Mbio, 2024 - Am Soc Microbiol
The rapid adaptive evolution of microbes is driven by strong selection pressure acting on
genetic variation. How adaptive genetic variation is generated within species and how such …

The Tc1-like elements with the spliceosomal introns in mollusk genomes

MV Puzakov, LV Puzakova, SV Cheresiz - Molecular Genetics and …, 2020 - Springer
Transposable elements (TEs) are DNA sequences capable of transpositions within the
genome and thus exerting a considerable influence on the genome functioning and …

Interspecies hybridization as a route of accessory chromosome origin in fungal species infecting wild grasses

WC Fagundes, M Moeller, A Feurtey, R Hansen… - bioRxiv, 2024 - biorxiv.org
Many fungal plant pathogens have dynamic genomic architectures that can contribute to
rapid evolution and adaptation to new niches. Zymoseptoria tritici, an important fungal …

Internally symmetrical stwintrons and related canonical introns in Hypoxylaceae species

E Fekete, F Pénzes, N Ág, C Scazzocchio, M Flipphi… - Journal of Fungi, 2021 - mdpi.com
Spliceosomal introns are pervasive in eukaryotes. Intron gains and losses have occurred
throughout evolution, but the origin of new introns is unclear. Stwintrons are complex …

Division of labour in a matrix, rather than phagocytosis or endosymbiosis, as a route for the origin of eukaryotic cells

A Bateman - Biology Direct, 2020 - Springer
Two apparently irreconcilable models dominate research into the origin of eukaryotes. In
one model, amitochondrial proto-eukaryotes emerged autogenously from the last universal …