Pioneer transcription factors: establishing competence for gene expression

KS Zaret, JS Carroll - Genes & development, 2011 - genesdev.cshlp.org
Transcription factors are adaptor molecules that detect regulatory sequences in the DNA
and target the assembly of protein complexes that control gene expression. Yet much of the …

International union of basic and clinical pharmacology CXIII: Nuclear receptor superfamily—Update 2023

TP Burris, IMS de Vera, I Cote, CA Flaveny… - Pharmacological …, 2023 - Elsevier
The NR superfamily comprises 48 transcription factors in humans that control a plethora of
gene network programs involved in a wide range of physiologic processes. This review will …

Whole-genome cartography of estrogen receptor α binding sites

CY Lin, VB Vega, JS Thomsen, T Zhang, SL Kong… - PLoS …, 2007 - journals.plos.org
Using a chromatin immunoprecipitation-paired end diTag cloning and sequencing strategy,
we mapped estrogen receptor α (ERα) binding sites in MCF-7 breast cancer cells. We …

[HTML][HTML] Nonclassical genomic ER/Sp and ER/AP-1 signaling pathways

S Safe, K Kim - Journal of molecular endocrinology, 2008 - ncbi.nlm.nih.gov
Abstract 17β-Estradiol (E2) binds to the estrogen receptor (ER) to activate gene expression
or repression and this involves both genomic (nuclear) and non-genomic (extranuclear …

Crosstalk of TGF-β and estrogen receptor signaling in breast cancer

AM Band, M Laiho - Journal of mammary gland biology and neoplasia, 2011 - Springer
Estrogen receptor-α (ERα) and transforming growth factor (TGF)-β signaling pathways are
major regulators during mammary gland development, function and tumorigenesis …

Oestrogen-receptor-mediated transcription and the influence of co-factors and chromatin state

KA Green, JS Carroll - Nature Reviews Cancer, 2007 - nature.com
Oestrogen receptor-α (ERα)-regulated transcription in breast cancer cells involves protein co-
factors that contribute to the regulation of chromatin structure. These include co-factors with …

Integrative model of genomic factors for determining binding site selection by estrogen receptor‐α

R Joseph, YL Orlov, M Huss, W Sun… - Molecular systems …, 2010 - embopress.org
A major question in transcription factor (TF) biology is why a TF binds to only a small fraction
of motif eligible binding sites in the genome. Using the estrogen receptor‐α as a model …

Positive regulation of estrogen receptor alpha in breast tumorigenesis

L Porras, H Ismail, S Mader - Cells, 2021 - mdpi.com
Estrogen receptor alpha (ERα, NR3A1) contributes through its expression in different tissues
to a spectrum of physiological processes, including reproductive system development and …

Genome-wide dynamics of chromatin binding of estrogen receptors α and β: mutual restriction and competitive site selection

TH Charn, ETB Liu, EC Chang, YK Lee… - Molecular …, 2010 - academic.oup.com
Estrogen receptors ERα and ERβ, members of the nuclear receptor superfamily, exert
profound effects on the gene expression and biological response programs of their target …

Characterization of enhancer function from genome-wide analyses

GA Maston, SG Landt, M Snyder… - Annual review of …, 2012 - annualreviews.org
There has been a recent surge in the use of genome-wide methodologies to identify and
annotate the transcriptional regulatory elements in the human genome. Here we review …