Members of BTB gene family of scaffold proteins suppress nitrate uptake and nitrogen use efficiency

V Araus, EA Vidal, T Puelma, S Alamos… - Plant …, 2016 - academic.oup.com
Abstract Development of crops with improved nitrogen use efficiency (NUE) is essential for
sustainable agriculture. However, achieving this goal has proven difficult since NUE is a …

Resolving the central metabolism of Arabidopsis guard cells

S Robaina-Estévez, DM Daloso, Y Zhang, AR Fernie… - Scientific Reports, 2017 - nature.com
Photosynthesis and water use efficiency, key factors affecting plant growth, are directly
controlled by microscopic and adjustable pores in the leaf—the stomata. The size of the …

The Characterization of a Novel PrMADS11 Transcription Factor from Pinus radiata Induced Early in Bent Pine Stem

T Méndez, J Guajardo, N Cruz, RA Gutiérrez… - International Journal of …, 2024 - mdpi.com
A novel MADS-box transcription factor from Pinus radiata D. Don was characterized.
PrMADS11 encodes a protein of 165 amino acids for a MADS-box transcription factor …

Identification of drought stress-responsive genes in rice (Oryza sativa) by meta-analysis of microarray data

P Sirohi, BS Yadav, S Afzal, A Mani, NK Singh - Journal of Genetics, 2020 - Springer
Meta-analysis provides a systematic access to the previously studied microarray datasets
that can recognize several common signatures of stresses. Three different datasets of abiotic …

On the effects of alternative optima in context-specific metabolic model predictions

S Robaina-Estévez, Z Nikoloski - PLoS computational biology, 2017 - journals.plos.org
The integration of experimental data into genome-scale metabolic models can greatly
improve flux predictions. This is achieved by restricting predictions to a more realistic context …

VANTED: a tool for integrative visualization and analysis of-omics data

A Hartmann, AM Jozefowicz - Plant Membrane Proteomics: Methods and …, 2018 - Springer
The investigation of biological systems from different perspectives leads, due to novel-omics
technologies, to large-scale, heterogeneous, and complex datasets. To elucidate molecular …

Genomic footprinting analyses from DNase-seq data to construct gene regulatory networks

TC Moyano, RA Gutiérrez, JM Alvarez - … Regulation: Methods and …, 2021 - Springer
Chromatin accessibility is directly linked with transcription in eukaryotes. Accessible regions
associated with regulatory proteins are highly sensitive to DNase I digestion and are termed …

Characterization of a Novel Prmads11 Transcription Factor from Pinus Radiata Early Induced in Bent Pine Stem

T Mendez, J Guajardo, N Cruz, R Gutierrez… - Available at SSRN … - papers.ssrn.com
A novel MADS-box transcription factor from Pinus radiata D. Don was characterized.
PrMADS11 of 871 bp encodes for a MADS-box transcription factor belonging to group II …

[PDF][PDF] Context-specific metabolic predictions: computational methods and applications

S Robaina Estevez - 2017 - publishup.uni-potsdam.de
All life-sustaining processes are ultimately driven by thousands of biochemical reactions
occurring in the cells: the metabolism. These reactions form an intricate network which …

Computational modeling of internal mechanical structure of plant cells

R Malgat - 2015 - inria.hal.science
Morphogenesis in plants is an active field of research. While genetics influence on plant
shape has been extensively studied, rheology through scales: from cells to the whole …