Transposable phage mu

RM Harshey - Mobile DNA III, 2015 - Wiley Online Library
Transposable phage Mu has played a historic role in the development of the mobile DNA
element field (1). The very first paper that christened this phage after its mu tator properties …

DNA-topology simplification by topoisomerases

A Hanke, R Ziraldo, SD Levene - Molecules, 2021 - mdpi.com
The topological properties of DNA molecules, supercoiling, knotting, and catenation, are
intimately connected with essential biological processes, such as gene expression …

The Mu story: how a maverick phage moved the field forward

RM Harshey - Mobile DNA, 2012 - Springer
This article traces the pioneering contributions of phage Mu to our current knowledge of how
movable elements move/transpose. Mu provided the first molecular evidence of insertion …

Application of the bacteriophage Mu-driven system for the integration/amplification of target genes in the chromosomes of engineered Gram-negative bacteria—mini …

VZ Akhverdyan, ER Gak, IL Tokmakova… - Applied microbiology …, 2011 - Springer
The advantages of phage Mu transposition-based systems for the chromosomal editing of
plasmid-less strains are reviewed. The cis and trans requirements for Mu phage-mediated …

The emerging diversity of transpososome architectures

F Dyda, M Chandler, AB Hickman - Quarterly reviews of biophysics, 2012 - cambridge.org
DNA transposases are enzymes that catalyze the movement of discrete pieces of DNA from
one location in the genome to another. Transposition occurs through a series of controlled …

DNA repair by the cryptic endonuclease activity of Mu transposase

W Choi, RM Harshey - … of the National Academy of Sciences, 2010 - National Acad Sciences
Phage Mu transposes by two distinct pathways depending on the specific stage of its life
cycle. A common θ strand transfer intermediate is resolved differentially in the two pathways …

Immunity of replicating Mu to self-integration: a novel mechanism employing MuB protein

J Ge, Z Lou, RM Harshey - Mobile DNA, 2010 - Springer
We describe a new immunity mechanism that protects actively replicating/transposing Mu
from self-integration. We show that this mechanism is distinct from the established cis …

Tangle analysis of difference topology experiments: applications to a Mu protein-DNA complex

I Darcy, J Luecke, M Vazquez - Algebraic & Geometric Topology, 2009 - msp.org
We develop topological methods for analyzing difference topology experiments involving 3–
string tangles. Difference topology is a novel technique used to unveil the structure of stable …

Determining the topology of stable protein–DNA complexes

IK Darcy, M Vazquez - Biochemical Society Transactions, 2013 - portlandpress.com
Difference topology is an experimental technique that can be used to unveil the topological
structure adopted by two or more DNA segments in a stable protein–DNA complex …

Difference Topology: Analysis of High-Order DNA-Protin Assemblies

M Jayaram, R Harshey - Mathematics of DNA Structure, Function and …, 2009 - Springer
DNA transactions in biological systems are often carried out by multisubunit protein
assemblies that confer a defined topology on their DNA target sites. A subset of …