From genome-wide associations to candidate causal variants by statistical fine-mapping

DJ Schaid, W Chen, NB Larson - Nature Reviews Genetics, 2018 - nature.com
Advancing from statistical associations of complex traits with genetic markers to
understanding the functional genetic variants that influence traits is often a complex process …

Prostate carcinogenesis: inflammatory storms

JS de Bono, C Guo, B Gurel, AM De Marzo… - Nature Reviews …, 2020 - nature.com
Prostate cancer is a major cause of cancer morbidity and mortality. Intra-prostatic
inflammation is a risk factor for prostate carcinogenesis, with diet, chemical injury and an …

Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction

DV Conti, BF Darst, LC Moss, EJ Saunders, X Sheng… - Nature …, 2021 - nature.com
Prostate cancer is a highly heritable disease with large disparities in incidence rates across
ancestry populations. We conducted a multiancestry meta-analysis of prostate cancer …

Characterizing prostate cancer risk through multi-ancestry genome-wide discovery of 187 novel risk variants

A Wang, J Shen, AA Rodriguez, EJ Saunders, F Chen… - Nature …, 2023 - nature.com
The transferability and clinical value of genetic risk scores (GRSs) across populations
remain limited due to an imbalance in genetic studies across ancestrally diverse …

A large-scale genome-wide association study in US Holstein cattle

J Jiang, L Ma, D Prakapenka, PM VanRaden… - Frontiers in …, 2019 - frontiersin.org
Genome-wide association study (GWAS) is a powerful approach to identify genomic regions
and genetic variants associated with phenotypes. However, only limited mutual confirmation …

Evidence of novel susceptibility variants for prostate cancer and a multiancestry polygenic risk score associated with aggressive disease in men of African ancestry

F Chen, RK Madduri, AA Rodriguez, BF Darst, A Chou… - European urology, 2023 - Elsevier
Background Genetic factors play an important role in prostate cancer (PCa) susceptibility.
Objective To discover common genetic variants contributing to the risk of PCa in men of …

Integrating transcription factor occupancy with transcriptome-wide association analysis identifies susceptibility genes in human cancers

J He, W Wen, A Beeghly, Z Chen, C Cao… - Nature …, 2022 - nature.com
Transcriptome-wide association studies (TWAS) have successfully discovered many
putative disease susceptibility genes. However, TWAS may suffer from inaccuracy of gene …

Androgen receptor binding sites enabling genetic prediction of mortality due to prostate cancer in cancer-free subjects

S Ito, X Liu, Y Ishikawa, DD Conti, N Otomo… - Nature …, 2023 - nature.com
Prostate cancer (PrCa) is the second most common cancer worldwide in males. While
strongly warranted, the prediction of mortality risk due to PrCa, especially before its …

Post-GWAS in prostate cancer: from genetic association to biological contribution

S Farashi, T Kryza, J Clements, J Batra - Nature Reviews Cancer, 2019 - nature.com
Genome-wide association studies (GWAS) have been successful in deciphering the genetic
component of predisposition to many human complex diseases including prostate cancer …

Allelic imbalance of chromatin accessibility in cancer identifies candidate causal risk variants and their mechanisms

D Grishin, A Gusev - Nature genetics, 2022 - nature.com
While many germline cancer risk variants have been identified through genome-wide
association studies (GWAS), the mechanisms by which these variants operate remain …