Toward a fully resolved fungal tree of life

TY James, JE Stajich, CT Hittinger… - Annual Review of …, 2020 - annualreviews.org
In this review, we discuss the current status and future challenges for fully elucidating the
fungal tree of life. In the last 15 years, advances in genomic technologies have …

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

MA Naranjo‐Ortiz, T Gabaldón - Biological Reviews, 2019 - Wiley Online Library
The fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes
characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities …

Outline of Fungi and fungus-like taxa

NN Wijayawardene, KD Hyde… - … Online: Journal of …, 2020 - e-space.mmu.ac.uk
This article provides an outline of the classification of the kingdom Fungi (including fossil
fungi. ie dispersed spores, mycelia, sporophores, mycorrhizas). We treat 19 phyla of fungi …

A genome-scale phylogeny of the kingdom Fungi

Y Li, JL Steenwyk, Y Chang, Y Wang, TY James… - Current Biology, 2021 - cell.com
Phylogenomic studies using genome-scale amounts of data have greatly improved
understanding of the tree of life. Despite the diversity, ecological significance, and …

Revisions to the classification, nomenclature, and diversity of eukaryotes

SM Adl, D Bass, CE Lane, J Lukeš… - Journal of Eukaryotic …, 2019 - Wiley Online Library
This revision of the classification of eukaryotes follows that of Adl et al., 2012 [J. Euk.
Microbiol. 59 (5)] and retains an emphasis on protists. Changes since have improved the …

High-level classification of the Fungi and a tool for evolutionary ecological analyses

L Tedersoo, S Sánchez-Ramírez, U Koljalg, M Bahram… - Fungal diversity, 2018 - Springer
High-throughput sequencing studies generate vast amounts of taxonomic data. Evolutionary
ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due …

[HTML][HTML] Divergent genomic trajectories predate the origin of animals and fungi

E Ocaña-Pallarès, TA Williams, D López-Escardó… - Nature, 2022 - nature.com
Animals and fungi have radically distinct morphologies, yet both evolved within the same
eukaryotic supergroup: Opisthokonta,. Here we reconstructed the trajectory of genetic …

Diploid-dominant life cycles characterize the early evolution of Fungi

KR Amses, DR Simmons… - Proceedings of the …, 2022 - National Acad Sciences
Most of the described species in kingdom Fungi are contained in two phyla, the Ascomycota
and the Basidiomycota (subkingdom Dikarya). As a result, our understanding of the biology …

Progress towards the tree of eukaryotes

PJ Keeling, F Burki - Current Biology, 2019 - cell.com
Developing a detailed understanding of how all known forms of life are related to one
another in the tree of life has been a major preoccupation of biology since the idea of tree …

Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota

LJ Galindo, P López-García, G Torruella… - Nature …, 2021 - nature.com
Compared to multicellular fungi and unicellular yeasts, unicellular fungi with free-living
flagellated stages (zoospores) remain poorly known and their phylogenetic position is often …